Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK2Q86Y07 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK2Q86Y07 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
VRK2Q86Y07 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK2Q86Y07 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VRK2Q86Y07 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 AL353705.2-201ENST00000428243 662 ntBASIC14.64□□□□□ -0.07
VRK2Q86Y07 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 GPS2P2-201ENST00000430745 888 ntBASIC14.64□□□□□ -0.07
VRK2Q86Y07 RBPMS2P1-201ENST00000437762 623 ntBASIC14.64□□□□□ -0.07
VRK2Q86Y07 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 AC105021.1-202ENST00000570572 669 ntBASIC14.64□□□□□ -0.07
VRK2Q86Y07 MIR3687-2-201ENST00000577708 61 ntBASIC14.64□□□□□ -0.07
VRK2Q86Y07 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 AC097359.3-201ENST00000603982 1210 ntBASIC14.64□□□□□ -0.07
VRK2Q86Y07 AC003101.2-201ENST00000612557 442 ntBASIC14.64□□□□□ -0.07
VRK2Q86Y07 AC018529.1-201ENST00000613063 361 ntBASIC14.64□□□□□ -0.07
VRK2Q86Y07 MIR3687-1-201ENST00000614492 61 ntBASIC14.64□□□□□ -0.07
VRK2Q86Y07 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VRK2Q86Y07 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.64□□□□□ -0.07
VRK2Q86Y07 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.63□□□□□ -0.07
VRK2Q86Y07 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 RPSAP43-201ENST00000402237 625 ntBASIC14.63□□□□□ -0.07
VRK2Q86Y07 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VRK2Q86Y07 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
VRK2Q86Y07 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms