Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 RN7SL736P-201ENST00000613111 269 ntBASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 AL359258.3-201ENST00000622910 2331 ntBASIC9.54□□□□□ -0.88
VPS13BQ7Z7G8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 IGLV3-15-201ENST00000518356 244 ntBASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 AC004923.1-202ENST00000642106 209 ntBASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 RPSAP36-202ENST00000494591 1261 ntBASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 PGGT1BP2-201ENST00000398621 1028 ntBASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 MIR4313-201ENST00000580760 101 ntBASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 AC073413.1-201ENST00000603927 732 ntBASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 RN7SL713P-201ENST00000582127 302 ntBASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 BX539320.1-201ENST00000623759 877 ntBASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 HLA-C-210ENST00000640219 976 ntBASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
VPS13BQ7Z7G8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13BQ7Z7G8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC9.52□□□□□ -0.88
VPS13BQ7Z7G8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13BQ7Z7G8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13BQ7Z7G8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13BQ7Z7G8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
VPS13BQ7Z7G8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
VPS13BQ7Z7G8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 MIR4750-201ENST00000584564 56 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 AL353726.2-201ENST00000623259 884 ntBASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC9.52□□□□□ -0.89
VPS13BQ7Z7G8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms