Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAPH1Q70E73 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 AC023908.3-201ENST00000564211 3047 ntBASIC15.97■□□□□ 0.15
RAPH1Q70E73 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
RAPH1Q70E73 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.96■□□□□ 0.15
RAPH1Q70E73 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 AC024267.1-201ENST00000582320 895 ntBASIC15.96■□□□□ 0.15
RAPH1Q70E73 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 ZNF259P1-201ENST00000407656 1365 ntBASIC15.96■□□□□ 0.15
RAPH1Q70E73 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAPH1Q70E73 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
RAPH1Q70E73 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.96■□□□□ 0.14
RAPH1Q70E73 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAPH1Q70E73 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAPH1Q70E73 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAPH1Q70E73 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RAPH1Q70E73 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
RAPH1Q70E73 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 AC098859.1-201ENST00000502915 1238 ntBASIC15.95■□□□□ 0.14
RAPH1Q70E73 RNA5SP416-201ENST00000516838 111 ntBASIC15.95■□□□□ 0.14
RAPH1Q70E73 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 AC243562.2-201ENST00000561247 970 ntBASIC15.95■□□□□ 0.14
RAPH1Q70E73 RARRES2P8-201ENST00000566335 367 ntBASIC15.95■□□□□ 0.14
RAPH1Q70E73 AL138918.1-201ENST00000568306 659 ntBASIC15.95■□□□□ 0.14
RAPH1Q70E73 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 SPTSSB-204ENST00000617024 1292 ntBASIC15.95■□□□□ 0.14
RAPH1Q70E73 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.95■□□□□ 0.14
RAPH1Q70E73 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RAPH1Q70E73 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.95■□□□□ 0.14
RAPH1Q70E73 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms