Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 MTND6P24-201ENST00000440466 518 ntBASIC17.8■□□□□ 0.44
SHC4Q6S5L8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHC4Q6S5L8 AL035456.1-201ENST00000456064 1369 ntBASIC17.79■□□□□ 0.44
SHC4Q6S5L8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.79■□□□□ 0.44
SHC4Q6S5L8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 AC211486.1-202ENST00000416371 468 ntBASIC17.79■□□□□ 0.44
SHC4Q6S5L8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 AC211476.1-201ENST00000503899 468 ntBASIC17.79■□□□□ 0.44
SHC4Q6S5L8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 AL079307.3-201ENST00000556114 283 ntBASIC17.79■□□□□ 0.44
SHC4Q6S5L8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 MIR6080-201ENST00000617359 66 ntBASIC17.79■□□□□ 0.44
SHC4Q6S5L8 AP001059.3-201ENST00000619053 235 ntBASIC17.79■□□□□ 0.44
SHC4Q6S5L8 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHC4Q6S5L8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 AC027612.4-201ENST00000605371 583 ntBASIC17.78■□□□□ 0.44
SHC4Q6S5L8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHC4Q6S5L8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms