Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTR9Q6PD62 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CTR9Q6PD62 NFIC-211ENST00000641145 8399 ntBASIC18.73■□□□□ 0.59
CTR9Q6PD62 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 AC138969.3-201ENST00000546612 1459 ntBASIC18.73■□□□□ 0.59
CTR9Q6PD62 AC138932.2-201ENST00000548268 1459 ntBASIC18.73■□□□□ 0.59
CTR9Q6PD62 AC126755.4-201ENST00000549796 1459 ntBASIC18.73■□□□□ 0.59
CTR9Q6PD62 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 AL136379.1-201ENST00000623471 2642 ntBASIC18.73■□□□□ 0.59
CTR9Q6PD62 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CTR9Q6PD62 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTR9Q6PD62 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 CR383656.12-201ENST00000549567 513 ntBASIC18.72■□□□□ 0.59
CTR9Q6PD62 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 AC063926.2-201ENST00000623766 1308 ntBASIC18.72■□□□□ 0.59
CTR9Q6PD62 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTR9Q6PD62 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.72■□□□□ 0.59
CTR9Q6PD62 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 DOC2GP-204ENST00000639052 2548 ntBASIC18.71■□□□□ 0.59
CTR9Q6PD62 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTR9Q6PD62 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms