Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 BNIP3P1-202ENST00000550043 1585 ntBASIC16.2■□□□□ 0.18
CASC4Q6P4E1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CASC4Q6P4E1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 TIMM8BP1-201ENST00000452384 211 ntBASIC16.19■□□□□ 0.18
CASC4Q6P4E1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 AC040169.1-201ENST00000565382 521 ntBASIC16.19■□□□□ 0.18
CASC4Q6P4E1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CASC4Q6P4E1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 REXO1L1P-202ENST00000608646 1974 ntBASIC16.18■□□□□ 0.18
CASC4Q6P4E1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 AC142381.1-201ENST00000426099 345 ntBASIC16.18■□□□□ 0.18
CASC4Q6P4E1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms