Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL031008.1-201ENST00000619963 541 ntBASIC15.33■□□□□ 0.04
RNF220Q5VTB9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.33■□□□□ 0.04
RNF220Q5VTB9 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.33■□□□□ 0.04
RNF220Q5VTB9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 LINC01144-201ENST00000626198 1710 ntBASIC15.32■□□□□ 0.04
RNF220Q5VTB9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 AC087481.3-201ENST00000602886 1894 ntBASIC15.32■□□□□ 0.04
RNF220Q5VTB9 PCGF3-213ENST00000620529 1899 ntBASIC15.32■□□□□ 0.04
RNF220Q5VTB9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 PRSS29P-201ENST00000440800 595 ntBASIC15.32■□□□□ 0.04
RNF220Q5VTB9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 AP002469.2-201ENST00000531724 424 ntBASIC15.32■□□□□ 0.04
RNF220Q5VTB9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 MIR7706-201ENST00000613747 67 ntBASIC15.32■□□□□ 0.04
RNF220Q5VTB9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 AC004790.2-201ENST00000623588 572 ntBASIC15.32■□□□□ 0.04
RNF220Q5VTB9 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.32■□□□□ 0.04
RNF220Q5VTB9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 BEND3P1-201ENST00000421591 1944 ntBASIC15.31■□□□□ 0.04
RNF220Q5VTB9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.31■□□□□ 0.04
RNF220Q5VTB9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 POU5F1P6-201ENST00000466990 990 ntBASIC15.31■□□□□ 0.04
RNF220Q5VTB9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 AC104692.2-201ENST00000603054 253 ntBASIC15.31■□□□□ 0.04
RNF220Q5VTB9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 ACTL9-202ENST00000612068 1252 ntBASIC15.31■□□□□ 0.04
RNF220Q5VTB9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 AC012569.1-201ENST00000591191 1524 ntBASIC15.31■□□□□ 0.04
RNF220Q5VTB9 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RNF220Q5VTB9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms