Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 KRT8P4-201ENST00000509735 1454 ntBASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDC42BPAQ5VT25 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 AC245884.6-201ENST00000515672 1067 ntBASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 DIO1-215ENST00000610607 796 ntTSL 5 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 AD000864.1-201ENST00000624076 2295 ntBASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDC42BPAQ5VT25 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 AC127383.1-201ENST00000444697 1800 ntBASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 FTLP10-202ENST00000505798 471 ntBASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 AL358472.3-201ENST00000608147 415 ntBASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 CDK7-214ENST00000626796 358 ntTSL 5 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 BLK-205ENST00000529894 2017 ntTSL 5 BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPAQ5VT25 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 RETN-203ENST00000629642 400 ntTSL 5 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 AL603832.2-201ENST00000566195 2125 ntBASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 MIR769-201ENST00000390225 118 ntBASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 MIR4683-201ENST00000579659 81 ntBASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 MIR4706-201ENST00000582134 82 ntBASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPAQ5VT25 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPAQ5VT25 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms