Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
LRRK2Q5S007 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
LRRK2Q5S007 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.46□□□□□ -0.25
LRRK2Q5S007 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.46□□□□□ -0.25
LRRK2Q5S007 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.46□□□□□ -0.25
LRRK2Q5S007 AC021723.1-201ENST00000486306 515 ntBASIC13.46□□□□□ -0.25
LRRK2Q5S007 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.46□□□□□ -0.25
LRRK2Q5S007 ALG1L6P-201ENST00000515248 758 ntBASIC13.46□□□□□ -0.25
LRRK2Q5S007 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.46□□□□□ -0.25
LRRK2Q5S007 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.46□□□□□ -0.25
LRRK2Q5S007 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 AC020922.3-201ENST00000595064 547 ntBASIC13.46□□□□□ -0.25
LRRK2Q5S007 AC138466.5-201ENST00000624002 808 ntBASIC13.46□□□□□ -0.25
LRRK2Q5S007 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.46□□□□□ -0.25
LRRK2Q5S007 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.46□□□□□ -0.25
LRRK2Q5S007 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 TBC1D3J-201ENST00000620719 1426 ntBASIC13.46□□□□□ -0.25
LRRK2Q5S007 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
LRRK2Q5S007 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRK2Q5S007 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRK2Q5S007 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRK2Q5S007 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 POM121L8P-201ENST00000417732 1281 ntBASIC13.46□□□□□ -0.26
LRRK2Q5S007 POM121L9P-203ENST00000441984 1285 ntBASIC13.46□□□□□ -0.26
LRRK2Q5S007 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LRRK2Q5S007 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LRRK2Q5S007 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
LRRK2Q5S007 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRK2Q5S007 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LRRK2Q5S007 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.45□□□□□ -0.26
LRRK2Q5S007 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AP001282.1-201ENST00000531301 1499 ntBASIC13.45□□□□□ -0.26
LRRK2Q5S007 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AC005740.2-201ENST00000511085 419 ntBASIC13.45□□□□□ -0.26
LRRK2Q5S007 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AC134043.2-201ENST00000624206 2238 ntBASIC13.45□□□□□ -0.26
LRRK2Q5S007 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 CAP2P1-201ENST00000557743 1390 ntBASIC13.45□□□□□ -0.26
LRRK2Q5S007 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LRRK2Q5S007 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AL139094.1-201ENST00000405549 1188 ntBASIC13.45□□□□□ -0.26
LRRK2Q5S007 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AC073150.1-201ENST00000450406 1084 ntBASIC13.45□□□□□ -0.26
LRRK2Q5S007 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
LRRK2Q5S007 AL160314.3-201ENST00000556041 767 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms