Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 AL645939.2-201ENST00000427340 991 ntBASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 RFPL4AP1-201ENST00000530883 850 ntBASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 AC051619.7-201ENST00000568314 623 ntBASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 AC027796.2-201ENST00000575326 344 ntBASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 AC003101.2-201ENST00000612557 442 ntBASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KHDC1Q4VXA5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 AC139749.1-202ENST00000617529 3139 ntBASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 AC015911.4-201ENST00000588022 1070 ntBASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 MIR4321-201ENST00000592276 80 ntBASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KHDC1Q4VXA5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.04■□□□□ 0.16
KHDC1Q4VXA5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms