Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 SRD5A3P1-201ENST00000603021 949 ntBASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 AC007431.3-201ENST00000623221 587 ntBASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC144BQ3MJ40 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 AC004461.2-201ENST00000629517 803 ntBASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC144BQ3MJ40 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 SDHAP3-202ENST00000515467 728 ntBASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 AC099063.4-201ENST00000641099 1602 ntBASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC144BQ3MJ40 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms