Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.77□□□□□ -0.05
RFX4Q33E94 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFX4Q33E94 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFX4Q33E94 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
RFX4Q33E94 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.77□□□□□ -0.05
RFX4Q33E94 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFX4Q33E94 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.77□□□□□ -0.05
RFX4Q33E94 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.77□□□□□ -0.05
RFX4Q33E94 AL513480.1-201ENST00000451731 511 ntBASIC14.77□□□□□ -0.05
RFX4Q33E94 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.77□□□□□ -0.05
RFX4Q33E94 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFX4Q33E94 AC117500.6-201ENST00000624871 588 ntBASIC14.77□□□□□ -0.05
RFX4Q33E94 FAM215A-202ENST00000632077 792 ntBASIC14.77□□□□□ -0.05
RFX4Q33E94 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.77□□□□□ -0.05
RFX4Q33E94 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFX4Q33E94 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RFX4Q33E94 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFX4Q33E94 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFX4Q33E94 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFX4Q33E94 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFX4Q33E94 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.77□□□□□ -0.05
RFX4Q33E94 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RFX4Q33E94 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFX4Q33E94 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RFX4Q33E94 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.76□□□□□ -0.05
RFX4Q33E94 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RFX4Q33E94 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RFX4Q33E94 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RFX4Q33E94 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RFX4Q33E94 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
RFX4Q33E94 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.76□□□□□ -0.05
RFX4Q33E94 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.76□□□□□ -0.05
RFX4Q33E94 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.76□□□□□ -0.05
RFX4Q33E94 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.76□□□□□ -0.05
RFX4Q33E94 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RFX4Q33E94 AC148477.8-201ENST00000624298 468 ntBASIC14.76□□□□□ -0.05
RFX4Q33E94 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.76□□□□□ -0.05
RFX4Q33E94 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.76□□□□□ -0.05
RFX4Q33E94 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RFX4Q33E94 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.76□□□□□ -0.05
RFX4Q33E94 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.76□□□□□ -0.05
RFX4Q33E94 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.76□□□□□ -0.05
RFX4Q33E94 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RFX4Q33E94 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
RFX4Q33E94 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.76□□□□□ -0.05
RFX4Q33E94 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFX4Q33E94 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
RFX4Q33E94 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.75□□□□□ -0.05
RFX4Q33E94 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RFX4Q33E94 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.75□□□□□ -0.05
RFX4Q33E94 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.75□□□□□ -0.05
RFX4Q33E94 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.75□□□□□ -0.05
RFX4Q33E94 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
RFX4Q33E94 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
RFX4Q33E94 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.75□□□□□ -0.05
RFX4Q33E94 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.75□□□□□ -0.05
RFX4Q33E94 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.75□□□□□ -0.05
RFX4Q33E94 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RFX4Q33E94 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.75□□□□□ -0.05
RFX4Q33E94 AC092910.1-201ENST00000482027 1129 ntBASIC14.75□□□□□ -0.05
RFX4Q33E94 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.75□□□□□ -0.05
RFX4Q33E94 AP002469.2-201ENST00000531724 424 ntBASIC14.75□□□□□ -0.05
RFX4Q33E94 MIR4751-201ENST00000578027 74 ntBASIC14.75□□□□□ -0.05
RFX4Q33E94 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
RFX4Q33E94 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RFX4Q33E94 MIR4321-201ENST00000592276 80 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms