Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B3Q16720 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B3Q16720 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 AC007950.2-201ENST00000615045 2347 ntBASIC19.34■□□□□ 0.69
ATP2B3Q16720 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B3Q16720 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B3Q16720 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B3Q16720 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 AC092552.1-201ENST00000547243 906 ntBASIC19.34■□□□□ 0.69
ATP2B3Q16720 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 CMC2-214ENST00000565925 640 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B3Q16720 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B3Q16720 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ATP2B3Q16720 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2B3Q16720 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ATP2B3Q16720 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B3Q16720 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B3Q16720 RERG-209ENST00000546331 1383 ntTSL 2 BASIC19.33■□□□□ 0.69
ATP2B3Q16720 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ATP2B3Q16720 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ATP2B3Q16720 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B3Q16720 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ATP2B3Q16720 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B3Q16720 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B3Q16720 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B3Q16720 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B3Q16720 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B3Q16720 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATP2B3Q16720 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B3Q16720 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B3Q16720 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 FAM86LP-201ENST00000478302 853 ntBASIC19.33■□□□□ 0.68
ATP2B3Q16720 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 AC026691.1-201ENST00000602502 2017 ntBASIC19.33■□□□□ 0.68
ATP2B3Q16720 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B3Q16720 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B3Q16720 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B3Q16720 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B3Q16720 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ATP2B3Q16720 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B3Q16720 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B3Q16720 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B3Q16720 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATP2B3Q16720 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 AL512384.1-201ENST00000406683 331 ntBASIC19.32■□□□□ 0.68
ATP2B3Q16720 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 AC011495.1-201ENST00000498085 584 ntBASIC19.32■□□□□ 0.68
ATP2B3Q16720 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 AC132938.2-201ENST00000579188 680 ntBASIC19.32■□□□□ 0.68
ATP2B3Q16720 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 AL591163.1-201ENST00000641757 987 ntBASIC19.32■□□□□ 0.68
ATP2B3Q16720 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2B3Q16720 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ATP2B3Q16720 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms