Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDR1Q08345 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDR1Q08345 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDR1Q08345 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.33■□□□□ 0.69
DDR1Q08345 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.33■□□□□ 0.69
DDR1Q08345 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.33■□□□□ 0.69
DDR1Q08345 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDR1Q08345 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDR1Q08345 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
DDR1Q08345 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.33■□□□□ 0.68
DDR1Q08345 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.33■□□□□ 0.68
DDR1Q08345 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDR1Q08345 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDR1Q08345 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.33■□□□□ 0.68
DDR1Q08345 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDR1Q08345 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC19.33■□□□□ 0.68
DDR1Q08345 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.33■□□□□ 0.68
DDR1Q08345 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.33■□□□□ 0.68
DDR1Q08345 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.33■□□□□ 0.68
DDR1Q08345 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDR1Q08345 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDR1Q08345 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
DDR1Q08345 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.33■□□□□ 0.68
DDR1Q08345 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.33■□□□□ 0.68
DDR1Q08345 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDR1Q08345 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDR1Q08345 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDR1Q08345 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.33■□□□□ 0.68
DDR1Q08345 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDR1Q08345 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDR1Q08345 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
DDR1Q08345 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 AC008132.1-202ENST00000342005 1389 ntBASIC19.32■□□□□ 0.68
DDR1Q08345 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.32■□□□□ 0.68
DDR1Q08345 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
DDR1Q08345 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.32■□□□□ 0.68
DDR1Q08345 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 ACTG1P2-201ENST00000415776 1125 ntBASIC19.32■□□□□ 0.68
DDR1Q08345 ACTG1P11-201ENST00000425411 1125 ntBASIC19.32■□□□□ 0.68
DDR1Q08345 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.32■□□□□ 0.68
DDR1Q08345 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.32■□□□□ 0.68
DDR1Q08345 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.32■□□□□ 0.68
DDR1Q08345 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.32■□□□□ 0.68
DDR1Q08345 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.32■□□□□ 0.68
DDR1Q08345 RN7SL11P-201ENST00000471305 293 ntBASIC19.32■□□□□ 0.68
DDR1Q08345 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.32■□□□□ 0.68
DDR1Q08345 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 RN7SL713P-201ENST00000582127 302 ntBASIC19.32■□□□□ 0.68
DDR1Q08345 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
DDR1Q08345 AC018635.2-201ENST00000608625 364 ntBASIC19.32■□□□□ 0.68
DDR1Q08345 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.32■□□□□ 0.68
DDR1Q08345 AF254983.2-201ENST00000612331 135 ntBASIC19.32■□□□□ 0.68
DDR1Q08345 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
DDR1Q08345 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.32■□□□□ 0.68
DDR1Q08345 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
DDR1Q08345 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.32■□□□□ 0.68
DDR1Q08345 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DDR1Q08345 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
DDR1Q08345 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
DDR1Q08345 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.31■□□□□ 0.68
DDR1Q08345 AC011477.6-201ENST00000604980 1927 ntBASIC19.31■□□□□ 0.68
DDR1Q08345 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.31■□□□□ 0.68
DDR1Q08345 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.31■□□□□ 0.68
DDR1Q08345 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDR1Q08345 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDR1Q08345 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 AL139094.1-201ENST00000405549 1188 ntBASIC19.31■□□□□ 0.68
DDR1Q08345 HIST2H2BB-201ENST00000449108 381 ntBASIC19.31■□□□□ 0.68
DDR1Q08345 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.31■□□□□ 0.68
DDR1Q08345 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.31■□□□□ 0.68
DDR1Q08345 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.31■□□□□ 0.68
DDR1Q08345 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDR1Q08345 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.31■□□□□ 0.68
DDR1Q08345 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.31■□□□□ 0.68
DDR1Q08345 PRKXP1-201ENST00000561423 1122 ntBASIC19.31■□□□□ 0.68
DDR1Q08345 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.31■□□□□ 0.68
DDR1Q08345 AC022748.3-201ENST00000621828 275 ntBASIC19.31■□□□□ 0.68
DDR1Q08345 AP001002.3-201ENST00000623482 206 ntBASIC19.31■□□□□ 0.68
DDR1Q08345 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.31■□□□□ 0.68
DDR1Q08345 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDR1Q08345 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms