Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.41□□□□□ -0.26
SSBP1Q04837 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SSBP1Q04837 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.41□□□□□ -0.26
SSBP1Q04837 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
SSBP1Q04837 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP1Q04837 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP1Q04837 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP1Q04837 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SSBP1Q04837 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP1Q04837 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SSBP1Q04837 AC073621.1-201ENST00000392730 636 ntBASIC13.4□□□□□ -0.26
SSBP1Q04837 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.4□□□□□ -0.26
SSBP1Q04837 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.4□□□□□ -0.26
SSBP1Q04837 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.4□□□□□ -0.26
SSBP1Q04837 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SSBP1Q04837 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP1Q04837 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP1Q04837 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.4□□□□□ -0.26
SSBP1Q04837 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 AC025062.2-201ENST00000605477 670 ntBASIC13.4□□□□□ -0.26
SSBP1Q04837 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.4□□□□□ -0.26
SSBP1Q04837 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 BNIP3P1-202ENST00000550043 1585 ntBASIC13.4□□□□□ -0.26
SSBP1Q04837 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SSBP1Q04837 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SSBP1Q04837 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.4□□□□□ -0.26
SSBP1Q04837 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SSBP1Q04837 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SSBP1Q04837 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP1Q04837 AL359881.3-201ENST00000602640 1721 ntBASIC13.39□□□□□ -0.27
SSBP1Q04837 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SSBP1Q04837 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP1Q04837 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP1Q04837 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.39□□□□□ -0.27
SSBP1Q04837 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP1Q04837 AC004987.2-201ENST00000395959 1148 ntBASIC13.39□□□□□ -0.27
SSBP1Q04837 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP1Q04837 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP1Q04837 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP1Q04837 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.39□□□□□ -0.27
SSBP1Q04837 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.39□□□□□ -0.27
SSBP1Q04837 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.39□□□□□ -0.27
SSBP1Q04837 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.39□□□□□ -0.27
SSBP1Q04837 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.39□□□□□ -0.27
SSBP1Q04837 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP1Q04837 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP1Q04837 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms