Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.11□□□□□ -0.15
EFNB1P98172 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNB1P98172 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNB1P98172 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNB1P98172 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNB1P98172 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNB1P98172 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.11□□□□□ -0.15
EFNB1P98172 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.11□□□□□ -0.15
EFNB1P98172 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.11□□□□□ -0.15
EFNB1P98172 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.11□□□□□ -0.15
EFNB1P98172 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.11□□□□□ -0.15
EFNB1P98172 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
EFNB1P98172 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 CICP11-201ENST00000434745 2827 ntBASIC14.11□□□□□ -0.15
EFNB1P98172 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.11□□□□□ -0.15
EFNB1P98172 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
EFNB1P98172 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
EFNB1P98172 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
EFNB1P98172 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
EFNB1P98172 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.1□□□□□ -0.15
EFNB1P98172 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
EFNB1P98172 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
EFNB1P98172 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
EFNB1P98172 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.1□□□□□ -0.15
EFNB1P98172 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.1□□□□□ -0.15
EFNB1P98172 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.1□□□□□ -0.15
EFNB1P98172 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 TFAMP1-201ENST00000412727 736 ntBASIC14.1□□□□□ -0.15
EFNB1P98172 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.1□□□□□ -0.15
EFNB1P98172 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.1□□□□□ -0.15
EFNB1P98172 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
EFNB1P98172 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
EFNB1P98172 AL513190.1-201ENST00000621254 727 ntBASIC14.1□□□□□ -0.15
EFNB1P98172 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.1□□□□□ -0.15
EFNB1P98172 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.1□□□□□ -0.15
EFNB1P98172 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.1□□□□□ -0.15
EFNB1P98172 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.1□□□□□ -0.15
EFNB1P98172 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.1□□□□□ -0.15
EFNB1P98172 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
EFNB1P98172 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
EFNB1P98172 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB1P98172 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
EFNB1P98172 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNB1P98172 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB1P98172 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.09□□□□□ -0.15
EFNB1P98172 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB1P98172 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNB1P98172 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
EFNB1P98172 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB1P98172 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
EFNB1P98172 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.09□□□□□ -0.15
EFNB1P98172 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB1P98172 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB1P98172 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
EFNB1P98172 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNB1P98172 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.09□□□□□ -0.15
EFNB1P98172 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms