Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HTRA3P83110 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HTRA3P83110 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HTRA3P83110 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HTRA3P83110 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HTRA3P83110 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
HTRA3P83110 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
HTRA3P83110 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.89■□□□□ 0.45
HTRA3P83110 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.89■□□□□ 0.45
HTRA3P83110 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 AL583805.1-201ENST00000391389 531 ntBASIC17.89■□□□□ 0.45
HTRA3P83110 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.89■□□□□ 0.45
HTRA3P83110 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.89■□□□□ 0.45
HTRA3P83110 VDAC1P1-201ENST00000439229 848 ntBASIC17.89■□□□□ 0.45
HTRA3P83110 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.89■□□□□ 0.45
HTRA3P83110 HLA-J-204ENST00000495278 958 ntBASIC17.89■□□□□ 0.45
HTRA3P83110 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.89■□□□□ 0.45
HTRA3P83110 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.89■□□□□ 0.45
HTRA3P83110 AC008805.1-201ENST00000590892 364 ntBASIC17.89■□□□□ 0.45
HTRA3P83110 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.89■□□□□ 0.45
HTRA3P83110 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.89■□□□□ 0.45
HTRA3P83110 AC005041.3-201ENST00000606287 649 ntBASIC17.89■□□□□ 0.45
HTRA3P83110 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.89■□□□□ 0.45
HTRA3P83110 AC138466.5-201ENST00000624002 808 ntBASIC17.89■□□□□ 0.45
HTRA3P83110 AL451007.2-201ENST00000632004 563 ntBASIC17.89■□□□□ 0.45
HTRA3P83110 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.89■□□□□ 0.45
HTRA3P83110 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 LINC01144-201ENST00000626198 1710 ntBASIC17.89■□□□□ 0.45
HTRA3P83110 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HTRA3P83110 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
HTRA3P83110 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.88■□□□□ 0.45
HTRA3P83110 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.88■□□□□ 0.45
HTRA3P83110 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.88■□□□□ 0.45
HTRA3P83110 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.88■□□□□ 0.45
HTRA3P83110 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.88■□□□□ 0.45
HTRA3P83110 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
HTRA3P83110 CHCHD2P9-201ENST00000461726 456 ntBASIC17.88■□□□□ 0.45
HTRA3P83110 PGAM1P12-201ENST00000505622 748 ntBASIC17.88■□□□□ 0.45
HTRA3P83110 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.88■□□□□ 0.45
HTRA3P83110 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.88■□□□□ 0.45
HTRA3P83110 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.88■□□□□ 0.45
HTRA3P83110 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC17.88■□□□□ 0.45
HTRA3P83110 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.88■□□□□ 0.45
HTRA3P83110 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.88■□□□□ 0.45
HTRA3P83110 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.88■□□□□ 0.45
HTRA3P83110 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.88■□□□□ 0.45
HTRA3P83110 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 AC018892.3-201ENST00000623986 2499 ntBASIC17.88■□□□□ 0.45
HTRA3P83110 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTRA3P83110 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTRA3P83110 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
HTRA3P83110 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTRA3P83110 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.87■□□□□ 0.45
HTRA3P83110 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTRA3P83110 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTRA3P83110 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTRA3P83110 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTRA3P83110 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTRA3P83110 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HTRA3P83110 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC17.87■□□□□ 0.45
HTRA3P83110 GCSHP3-201ENST00000431120 391 ntBASIC17.87■□□□□ 0.45
HTRA3P83110 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.87■□□□□ 0.45
HTRA3P83110 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.87■□□□□ 0.45
HTRA3P83110 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC17.87■□□□□ 0.45
HTRA3P83110 ABHD17AP9-201ENST00000561925 548 ntBASIC17.87■□□□□ 0.45
HTRA3P83110 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.87■□□□□ 0.45
HTRA3P83110 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HTRA3P83110 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTRA3P83110 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTRA3P83110 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTRA3P83110 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HTRA3P83110 E2F3P2-201ENST00000447755 1422 ntBASIC17.87■□□□□ 0.45
HTRA3P83110 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.87■□□□□ 0.45
HTRA3P83110 AL603756.1-201ENST00000606511 2163 ntBASIC17.87■□□□□ 0.45
HTRA3P83110 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms