Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
UBA52P62987 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.75□□□□□ -0.21
UBA52P62987 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 LINC02447-202ENST00000501888 2146 ntBASIC13.75□□□□□ -0.21
UBA52P62987 CICP14-201ENST00000629111 2732 ntBASIC13.75□□□□□ -0.21
UBA52P62987 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.75□□□□□ -0.21
UBA52P62987 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 AL590787.1-201ENST00000568856 1315 ntBASIC13.75□□□□□ -0.21
UBA52P62987 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.75□□□□□ -0.21
UBA52P62987 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.75□□□□□ -0.21
UBA52P62987 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.75□□□□□ -0.21
UBA52P62987 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
UBA52P62987 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.75□□□□□ -0.21
UBA52P62987 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.75□□□□□ -0.21
UBA52P62987 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
UBA52P62987 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.75□□□□□ -0.21
UBA52P62987 FAM185BP-201ENST00000443595 716 ntBASIC13.75□□□□□ -0.21
UBA52P62987 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.75□□□□□ -0.21
UBA52P62987 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UBA52P62987 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.75□□□□□ -0.21
UBA52P62987 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
UBA52P62987 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
UBA52P62987 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
UBA52P62987 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.75□□□□□ -0.21
UBA52P62987 TMBIM7P-203ENST00000641617 1718 ntBASIC13.75□□□□□ -0.21
UBA52P62987 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.75□□□□□ -0.21
UBA52P62987 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
UBA52P62987 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
UBA52P62987 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.75□□□□□ -0.21
UBA52P62987 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
UBA52P62987 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.74□□□□□ -0.21
UBA52P62987 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
UBA52P62987 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 AL137784.3-201ENST00000623858 2288 ntBASIC13.74□□□□□ -0.21
UBA52P62987 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.74□□□□□ -0.21
UBA52P62987 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.74□□□□□ -0.21
UBA52P62987 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.74□□□□□ -0.21
UBA52P62987 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.74□□□□□ -0.21
UBA52P62987 AC092474.2-201ENST00000424288 719 ntBASIC13.74□□□□□ -0.21
UBA52P62987 FAM86GP-201ENST00000448322 971 ntBASIC13.74□□□□□ -0.21
UBA52P62987 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.74□□□□□ -0.21
UBA52P62987 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
UBA52P62987 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.74□□□□□ -0.21
UBA52P62987 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
UBA52P62987 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.74□□□□□ -0.21
UBA52P62987 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.74□□□□□ -0.21
UBA52P62987 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
UBA52P62987 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.74□□□□□ -0.21
UBA52P62987 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.74□□□□□ -0.21
UBA52P62987 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.74□□□□□ -0.21
UBA52P62987 LINC00628-201ENST00000628516 1289 ntBASIC13.74□□□□□ -0.21
UBA52P62987 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
UBA52P62987 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.74□□□□□ -0.21
UBA52P62987 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBA52P62987 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms