Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.13■□□□□ 0.49
CHMP4BP1P59074 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CHMP4BP1P59074 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 AP006294.1-201ENST00000415407 339 ntBASIC18.12■□□□□ 0.49
CHMP4BP1P59074 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 HILS1-202ENST00000545329 423 ntBASIC18.12■□□□□ 0.49
CHMP4BP1P59074 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 AC132938.2-201ENST00000579188 680 ntBASIC18.12■□□□□ 0.49
CHMP4BP1P59074 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 AL033527.5-202ENST00000641632 1098 ntBASIC18.12■□□□□ 0.49
CHMP4BP1P59074 AL591163.1-201ENST00000641757 987 ntBASIC18.12■□□□□ 0.49
CHMP4BP1P59074 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 GGT4P-201ENST00000623672 1708 ntBASIC18.12■□□□□ 0.49
CHMP4BP1P59074 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHMP4BP1P59074 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 AL136379.1-201ENST00000623471 2642 ntBASIC18.11■□□□□ 0.49
CHMP4BP1P59074 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 AC087499.6-201ENST00000411576 835 ntBASIC18.11■□□□□ 0.49
CHMP4BP1P59074 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 DFFBP1-201ENST00000433250 979 ntBASIC18.11■□□□□ 0.49
CHMP4BP1P59074 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 AC061975.2-201ENST00000581722 295 ntBASIC18.11■□□□□ 0.49
CHMP4BP1P59074 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 AC006538.1-201ENST00000567905 1585 ntBASIC18.11■□□□□ 0.49
CHMP4BP1P59074 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.11■□□□□ 0.49
CHMP4BP1P59074 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms