Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 AP003680.1-201ENST00000598970 3660 ntBASIC14.28□□□□□ -0.12
SUMO3P55854 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SUMO3P55854 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SUMO3P55854 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
SUMO3P55854 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SUMO3P55854 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SUMO3P55854 AC090616.6-203ENST00000579186 1945 ntBASIC14.27□□□□□ -0.12
SUMO3P55854 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.27□□□□□ -0.12
SUMO3P55854 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.27□□□□□ -0.12
SUMO3P55854 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SUMO3P55854 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.27□□□□□ -0.12
SUMO3P55854 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SUMO3P55854 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SUMO3P55854 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SUMO3P55854 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SUMO3P55854 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SUMO3P55854 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.27□□□□□ -0.12
SUMO3P55854 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SUMO3P55854 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SUMO3P55854 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SUMO3P55854 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.27□□□□□ -0.13
SUMO3P55854 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.27□□□□□ -0.13
SUMO3P55854 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.27□□□□□ -0.13
SUMO3P55854 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.27□□□□□ -0.13
SUMO3P55854 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.27□□□□□ -0.13
SUMO3P55854 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.27□□□□□ -0.13
SUMO3P55854 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.27□□□□□ -0.13
SUMO3P55854 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.27□□□□□ -0.13
SUMO3P55854 MEIS3P1-201ENST00000495167 958 ntBASIC14.27□□□□□ -0.13
SUMO3P55854 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.27□□□□□ -0.13
SUMO3P55854 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.13
SUMO3P55854 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.27□□□□□ -0.13
SUMO3P55854 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SUMO3P55854 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.27□□□□□ -0.13
SUMO3P55854 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.27□□□□□ -0.13
SUMO3P55854 AC009118.2-201ENST00000613275 655 ntBASIC14.27□□□□□ -0.13
SUMO3P55854 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.27□□□□□ -0.13
SUMO3P55854 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SUMO3P55854 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SUMO3P55854 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.27□□□□□ -0.13
SUMO3P55854 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SUMO3P55854 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SUMO3P55854 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
SUMO3P55854 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
SUMO3P55854 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SUMO3P55854 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SUMO3P55854 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SUMO3P55854 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.27□□□□□ -0.13
SUMO3P55854 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SUMO3P55854 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.27□□□□□ -0.13
SUMO3P55854 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
SUMO3P55854 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
SUMO3P55854 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 MEP1AP4-201ENST00000423244 1087 ntBASIC14.26□□□□□ -0.13
SUMO3P55854 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.26□□□□□ -0.13
SUMO3P55854 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SUMO3P55854 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
SUMO3P55854 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
SUMO3P55854 AC011467.4-201ENST00000594891 528 ntBASIC14.26□□□□□ -0.13
SUMO3P55854 SRD5A3P1-201ENST00000603021 949 ntBASIC14.26□□□□□ -0.13
SUMO3P55854 AC004840.1-201ENST00000636359 365 ntBASIC14.26□□□□□ -0.13
SUMO3P55854 AF228730.6-201ENST00000641497 218 ntBASIC14.26□□□□□ -0.13
SUMO3P55854 AC084121.3-201ENST00000641716 218 ntBASIC14.26□□□□□ -0.13
SUMO3P55854 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms