Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 RN7SL828P-201ENST00000607615 303 ntBASIC16.51■□□□□ 0.23
HADHBP55084 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.51■□□□□ 0.23
HADHBP55084 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.51■□□□□ 0.23
HADHBP55084 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
HADHBP55084 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 AJ011931.1-201ENST00000618749 2492 ntBASIC16.51■□□□□ 0.23
HADHBP55084 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
HADHBP55084 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HADHBP55084 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HADHBP55084 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.5■□□□□ 0.23
HADHBP55084 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.5■□□□□ 0.23
HADHBP55084 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 AC004461.1-201ENST00000412461 403 ntBASIC16.5■□□□□ 0.23
HADHBP55084 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.5■□□□□ 0.23
HADHBP55084 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.5■□□□□ 0.23
HADHBP55084 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 SPDYE14P-201ENST00000442619 822 ntBASIC16.5■□□□□ 0.23
HADHBP55084 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 CEND1P1-201ENST00000451006 455 ntBASIC16.5■□□□□ 0.23
HADHBP55084 POLD2P1-201ENST00000511220 997 ntBASIC16.5■□□□□ 0.23
HADHBP55084 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.5■□□□□ 0.23
HADHBP55084 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
HADHBP55084 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
HADHBP55084 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.5■□□□□ 0.23
HADHBP55084 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.5■□□□□ 0.23
HADHBP55084 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.5■□□□□ 0.23
HADHBP55084 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.5■□□□□ 0.23
HADHBP55084 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHBP55084 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HADHBP55084 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HADHBP55084 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HADHBP55084 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.49■□□□□ 0.23
HADHBP55084 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
HADHBP55084 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.49■□□□□ 0.23
HADHBP55084 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
HADHBP55084 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HADHBP55084 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HADHBP55084 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
HADHBP55084 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.49■□□□□ 0.23
HADHBP55084 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HADHBP55084 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HADHBP55084 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.49■□□□□ 0.23
HADHBP55084 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.49■□□□□ 0.23
HADHBP55084 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HADHBP55084 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HADHBP55084 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HADHBP55084 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HADHBP55084 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.49■□□□□ 0.23
HADHBP55084 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.49■□□□□ 0.23
HADHBP55084 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.49■□□□□ 0.23
HADHBP55084 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.49■□□□□ 0.23
HADHBP55084 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HADHBP55084 AC106881.1-201ENST00000605849 3329 ntBASIC16.49■□□□□ 0.23
HADHBP55084 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HADHBP55084 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms