Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.12■□□□□ 0.01
PRIM2P49643 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.12■□□□□ 0.01
PRIM2P49643 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
PRIM2P49643 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PRIM2P49643 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.12■□□□□ 0.01
PRIM2P49643 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.12■□□□□ 0.01
PRIM2P49643 ADH5P3-201ENST00000433842 1137 ntBASIC15.12■□□□□ 0.01
PRIM2P49643 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.12■□□□□ 0.01
PRIM2P49643 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.12■□□□□ 0.01
PRIM2P49643 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.12■□□□□ 0.01
PRIM2P49643 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.12■□□□□ 0.01
PRIM2P49643 IGHV3-62-201ENST00000520057 340 ntBASIC15.12■□□□□ 0.01
PRIM2P49643 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PRIM2P49643 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.12■□□□□ 0.01
PRIM2P49643 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PRIM2P49643 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.12■□□□□ 0.01
PRIM2P49643 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
PRIM2P49643 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.12■□□□□ 0.01
PRIM2P49643 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.12■□□□□ 0.01
PRIM2P49643 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 AC087481.3-201ENST00000602886 1894 ntBASIC15.12■□□□□ 0.01
PRIM2P49643 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.12■□□□□ 0.01
PRIM2P49643 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PRIM2P49643 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.12■□□□□ 0.01
PRIM2P49643 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PRIM2P49643 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.11■□□□□ 0.01
PRIM2P49643 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.11■□□□□ 0.01
PRIM2P49643 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.11■□□□□ 0.01
PRIM2P49643 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PRIM2P49643 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
PRIM2P49643 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.11■□□□□ 0.01
PRIM2P49643 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.11■□□□□ 0.01
PRIM2P49643 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.11■□□□□ 0.01
PRIM2P49643 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.11■□□□□ 0.01
PRIM2P49643 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.11■□□□□ 0.01
PRIM2P49643 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PRIM2P49643 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.11■□□□□ 0.01
PRIM2P49643 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PRIM2P49643 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 TMBIM7P-203ENST00000641617 1718 ntBASIC15.11■□□□□ 0.01
PRIM2P49643 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.11■□□□□ 0.01
PRIM2P49643 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.11■□□□□ 0.01
PRIM2P49643 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PRIM2P49643 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.11■□□□□ 0.01
PRIM2P49643 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.11■□□□□ 0.01
PRIM2P49643 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.11■□□□□ 0.01
PRIM2P49643 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.11■□□□□ 0.01
PRIM2P49643 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRIM2P49643 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PRIM2P49643 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.1■□□□□ 0.01
PRIM2P49643 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PRIM2P49643 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PRIM2P49643 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PRIM2P49643 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms