Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.67■□□□□ 0.26
LHX1P48742 KRT17P7-201ENST00000451704 1104 ntBASIC16.67■□□□□ 0.26
LHX1P48742 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.67■□□□□ 0.26
LHX1P48742 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.67■□□□□ 0.26
LHX1P48742 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.67■□□□□ 0.26
LHX1P48742 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.67■□□□□ 0.26
LHX1P48742 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX1P48742 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.67■□□□□ 0.26
LHX1P48742 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.67■□□□□ 0.26
LHX1P48742 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.67■□□□□ 0.26
LHX1P48742 WFDC1-204ENST00000613603 549 ntBASIC16.67■□□□□ 0.26
LHX1P48742 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX1P48742 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX1P48742 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LHX1P48742 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LHX1P48742 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX1P48742 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LHX1P48742 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LHX1P48742 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LHX1P48742 AP005117.1-202ENST00000581724 1908 ntBASIC16.66■□□□□ 0.26
LHX1P48742 AL365203.3-201ENST00000609742 2057 ntBASIC16.66■□□□□ 0.26
LHX1P48742 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX1P48742 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LHX1P48742 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.66■□□□□ 0.26
LHX1P48742 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX1P48742 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.66■□□□□ 0.26
LHX1P48742 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.66■□□□□ 0.26
LHX1P48742 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LHX1P48742 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.66■□□□□ 0.26
LHX1P48742 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.66■□□□□ 0.26
LHX1P48742 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX1P48742 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.66■□□□□ 0.26
LHX1P48742 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.66■□□□□ 0.26
LHX1P48742 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
LHX1P48742 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX1P48742 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.66■□□□□ 0.26
LHX1P48742 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.66■□□□□ 0.26
LHX1P48742 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LHX1P48742 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LHX1P48742 AC133539.2-201ENST00000604757 467 ntBASIC16.66■□□□□ 0.26
LHX1P48742 AL033527.5-201ENST00000641382 801 ntBASIC16.66■□□□□ 0.26
LHX1P48742 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.66■□□□□ 0.26
LHX1P48742 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LHX1P48742 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LHX1P48742 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX1P48742 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.65■□□□□ 0.26
LHX1P48742 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LHX1P48742 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX1P48742 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.65■□□□□ 0.26
LHX1P48742 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
LHX1P48742 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LHX1P48742 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LHX1P48742 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LHX1P48742 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LHX1P48742 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX1P48742 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LHX1P48742 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX1P48742 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX1P48742 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LHX1P48742 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
LHX1P48742 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
LHX1P48742 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
LHX1P48742 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LHX1P48742 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LHX1P48742 AC134915.1-201ENST00000426461 574 ntBASIC16.65■□□□□ 0.26
LHX1P48742 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
LHX1P48742 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX1P48742 INE1-201ENST00000456273 945 ntBASIC16.65■□□□□ 0.26
LHX1P48742 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX1P48742 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX1P48742 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.65■□□□□ 0.26
LHX1P48742 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
LHX1P48742 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.65■□□□□ 0.26
LHX1P48742 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.65■□□□□ 0.26
LHX1P48742 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LHX1P48742 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.65■□□□□ 0.26
LHX1P48742 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LHX1P48742 AL049840.4-201ENST00000602422 811 ntBASIC16.65■□□□□ 0.26
LHX1P48742 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.65■□□□□ 0.26
LHX1P48742 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LHX1P48742 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX1P48742 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LHX1P48742 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.65■□□□□ 0.26
LHX1P48742 AP003680.1-201ENST00000598970 3660 ntBASIC16.65■□□□□ 0.26
LHX1P48742 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.65■□□□□ 0.26
LHX1P48742 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LHX1P48742 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms