Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.53□□□□□ -0.08
RFC3P40938 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.53□□□□□ -0.08
RFC3P40938 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.53□□□□□ -0.08
RFC3P40938 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 LINC01115-203ENST00000606068 577 ntBASIC14.53□□□□□ -0.08
RFC3P40938 AC074044.1-201ENST00000609673 707 ntBASIC14.53□□□□□ -0.08
RFC3P40938 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.53□□□□□ -0.08
RFC3P40938 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RFC3P40938 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
RFC3P40938 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.53□□□□□ -0.08
RFC3P40938 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RFC3P40938 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.53□□□□□ -0.08
RFC3P40938 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
RFC3P40938 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.53□□□□□ -0.08
RFC3P40938 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RFC3P40938 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RFC3P40938 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.53□□□□□ -0.08
RFC3P40938 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
RFC3P40938 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.52□□□□□ -0.08
RFC3P40938 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RFC3P40938 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFC3P40938 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFC3P40938 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.52□□□□□ -0.08
RFC3P40938 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RFC3P40938 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.52□□□□□ -0.08
RFC3P40938 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFC3P40938 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFC3P40938 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RFC3P40938 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.52□□□□□ -0.08
RFC3P40938 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFC3P40938 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.52□□□□□ -0.09
RFC3P40938 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.52□□□□□ -0.09
RFC3P40938 INE1-201ENST00000456273 945 ntBASIC14.52□□□□□ -0.09
RFC3P40938 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFC3P40938 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
RFC3P40938 AC055876.2-201ENST00000531834 546 ntBASIC14.52□□□□□ -0.09
RFC3P40938 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.52□□□□□ -0.09
RFC3P40938 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.52□□□□□ -0.09
RFC3P40938 TIMM17BP1-201ENST00000545713 516 ntBASIC14.52□□□□□ -0.09
RFC3P40938 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
RFC3P40938 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.52□□□□□ -0.09
RFC3P40938 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.52□□□□□ -0.09
RFC3P40938 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RFC3P40938 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.52□□□□□ -0.09
RFC3P40938 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RFC3P40938 AC132872.4-202ENST00000622924 2756 ntBASIC14.52□□□□□ -0.09
RFC3P40938 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
RFC3P40938 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
RFC3P40938 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFC3P40938 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RFC3P40938 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFC3P40938 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.52□□□□□ -0.09
RFC3P40938 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFC3P40938 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.52□□□□□ -0.09
RFC3P40938 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RFC3P40938 AC006449.6-201ENST00000612330 2296 ntBASIC14.52□□□□□ -0.09
RFC3P40938 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
RFC3P40938 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.51□□□□□ -0.09
RFC3P40938 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.51□□□□□ -0.09
RFC3P40938 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
RFC3P40938 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
RFC3P40938 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.51□□□□□ -0.09
RFC3P40938 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 AL391825.1-201ENST00000457671 1364 ntBASIC14.51□□□□□ -0.09
RFC3P40938 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.51□□□□□ -0.09
RFC3P40938 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RFC3P40938 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RFC3P40938 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.51□□□□□ -0.09
RFC3P40938 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.51□□□□□ -0.09
RFC3P40938 FO393414.2-201ENST00000405153 598 ntBASIC14.51□□□□□ -0.09
RFC3P40938 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 AP006294.1-201ENST00000415407 339 ntBASIC14.51□□□□□ -0.09
RFC3P40938 MYCLP2-201ENST00000449268 967 ntBASIC14.51□□□□□ -0.09
RFC3P40938 RN7SL752P-201ENST00000463779 287 ntBASIC14.51□□□□□ -0.09
RFC3P40938 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.51□□□□□ -0.09
RFC3P40938 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms