Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.27■□□□□ 0.68
PDE6BP35913 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDE6BP35913 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDE6BP35913 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDE6BP35913 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDE6BP35913 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.27■□□□□ 0.67
PDE6BP35913 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDE6BP35913 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDE6BP35913 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.26■□□□□ 0.67
PDE6BP35913 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
PDE6BP35913 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE6BP35913 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDE6BP35913 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.26■□□□□ 0.67
PDE6BP35913 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 MPRIPP1-201ENST00000452433 1089 ntBASIC19.26■□□□□ 0.67
PDE6BP35913 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE6BP35913 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.26■□□□□ 0.67
PDE6BP35913 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.26■□□□□ 0.67
PDE6BP35913 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.26■□□□□ 0.67
PDE6BP35913 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.26■□□□□ 0.67
PDE6BP35913 AC244157.2-201ENST00000616239 1006 ntBASIC19.26■□□□□ 0.67
PDE6BP35913 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.26■□□□□ 0.67
PDE6BP35913 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.26■□□□□ 0.67
PDE6BP35913 SNX1-214ENST00000625244 324 ntTSL 5 BASIC19.26■□□□□ 0.67
PDE6BP35913 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.26■□□□□ 0.67
PDE6BP35913 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDE6BP35913 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PDE6BP35913 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PDE6BP35913 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE6BP35913 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE6BP35913 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PDE6BP35913 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE6BP35913 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.25■□□□□ 0.67
PDE6BP35913 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PDE6BP35913 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PDE6BP35913 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.25■□□□□ 0.67
PDE6BP35913 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.25■□□□□ 0.67
PDE6BP35913 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.25■□□□□ 0.67
PDE6BP35913 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.25■□□□□ 0.67
PDE6BP35913 MIR4722-201ENST00000578292 60 ntBASIC19.25■□□□□ 0.67
PDE6BP35913 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.25■□□□□ 0.67
PDE6BP35913 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDE6BP35913 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.25■□□□□ 0.67
PDE6BP35913 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PDE6BP35913 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PDE6BP35913 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PDE6BP35913 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDE6BP35913 AL139384.1-201ENST00000612143 3047 ntBASIC19.25■□□□□ 0.67
PDE6BP35913 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.24■□□□□ 0.67
PDE6BP35913 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PDE6BP35913 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE6BP35913 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PDE6BP35913 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.24■□□□□ 0.67
PDE6BP35913 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 ALOX12P2-203ENST00000570921 1945 ntBASIC19.24■□□□□ 0.67
PDE6BP35913 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PDE6BP35913 DEF8-202ENST00000418391 852 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE6BP35913 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.24■□□□□ 0.67
PDE6BP35913 AC016700.1-201ENST00000429424 312 ntBASIC19.24■□□□□ 0.67
PDE6BP35913 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.24■□□□□ 0.67
PDE6BP35913 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.24■□□□□ 0.67
PDE6BP35913 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC19.24■□□□□ 0.67
PDE6BP35913 AC007663.3-201ENST00000609632 465 ntBASIC19.24■□□□□ 0.67
PDE6BP35913 AC138649.2-201ENST00000615886 705 ntBASIC19.24■□□□□ 0.67
PDE6BP35913 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
PDE6BP35913 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDE6BP35913 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms