Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC21.82■■□□□ 1.08
CPS1P31327 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC21.82■■□□□ 1.08
CPS1P31327 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 AC012313.1-201ENST00000593393 3059 ntBASIC21.82■■□□□ 1.08
CPS1P31327 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPS1P31327 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CPS1P31327 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 AC022211.2-201ENST00000585075 2527 ntBASIC21.81■■□□□ 1.08
CPS1P31327 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC21.81■■□□□ 1.08
CPS1P31327 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CPS1P31327 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CPS1P31327 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC21.81■■□□□ 1.08
CPS1P31327 EID1-202ENST00000560490 584 ntTSL 3 BASIC21.81■■□□□ 1.08
CPS1P31327 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC21.81■■□□□ 1.08
CPS1P31327 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CPS1P31327 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.81■■□□□ 1.08
CPS1P31327 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC21.81■■□□□ 1.08
CPS1P31327 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CPS1P31327 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC21.81■■□□□ 1.08
CPS1P31327 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.81■■□□□ 1.08
CPS1P31327 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.81■■□□□ 1.08
CPS1P31327 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CPS1P31327 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CPS1P31327 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPS1P31327 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CPS1P31327 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CPS1P31327 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CPS1P31327 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC21.8■■□□□ 1.08
CPS1P31327 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CPS1P31327 AC127024.7-201ENST00000625101 200 ntBASIC21.8■■□□□ 1.08
CPS1P31327 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CPS1P31327 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.8■■□□□ 1.08
CPS1P31327 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.8■■□□□ 1.08
CPS1P31327 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CPS1P31327 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CPS1P31327 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC21.8■■□□□ 1.08
CPS1P31327 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.8■■□□□ 1.08
CPS1P31327 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
CPS1P31327 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CPS1P31327 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CPS1P31327 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CPS1P31327 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC21.8■■□□□ 1.08
CPS1P31327 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPS1P31327 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CPS1P31327 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.79■■□□□ 1.08
CPS1P31327 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CPS1P31327 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.79■■□□□ 1.08
CPS1P31327 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CPS1P31327 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CPS1P31327 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.79■■□□□ 1.08
CPS1P31327 FLJ38576-201ENST00000623820 2459 ntBASIC21.79■■□□□ 1.08
CPS1P31327 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC21.79■■□□□ 1.08
CPS1P31327 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC21.79■■□□□ 1.08
CPS1P31327 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPS1P31327 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC21.79■■□□□ 1.08
CPS1P31327 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
CPS1P31327 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC21.79■■□□□ 1.08
CPS1P31327 MIR4649-201ENST00000582839 64 ntBASIC21.79■■□□□ 1.08
CPS1P31327 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms