Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.3■□□□□ 0.68
TM4SF1P30408 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TM4SF1P30408 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TM4SF1P30408 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.3■□□□□ 0.68
TM4SF1P30408 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.3■□□□□ 0.68
TM4SF1P30408 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.3■□□□□ 0.68
TM4SF1P30408 AL354877.1-201ENST00000424412 413 ntBASIC19.3■□□□□ 0.68
TM4SF1P30408 EIF3FP3-201ENST00000434851 1086 ntBASIC19.3■□□□□ 0.68
TM4SF1P30408 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.3■□□□□ 0.68
TM4SF1P30408 MAGEA5-201ENST00000446757 942 ntBASIC19.3■□□□□ 0.68
TM4SF1P30408 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC19.3■□□□□ 0.68
TM4SF1P30408 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.3■□□□□ 0.68
TM4SF1P30408 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.3■□□□□ 0.68
TM4SF1P30408 AL133499.1-201ENST00000596207 608 ntBASIC19.3■□□□□ 0.68
TM4SF1P30408 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.3■□□□□ 0.68
TM4SF1P30408 ZACNP1-201ENST00000612259 710 ntBASIC19.3■□□□□ 0.68
TM4SF1P30408 AP001002.3-201ENST00000623482 206 ntBASIC19.3■□□□□ 0.68
TM4SF1P30408 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.3■□□□□ 0.68
TM4SF1P30408 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.3■□□□□ 0.68
TM4SF1P30408 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF1P30408 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.3■□□□□ 0.68
TM4SF1P30408 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TM4SF1P30408 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF1P30408 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF1P30408 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
TM4SF1P30408 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF1P30408 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.3■□□□□ 0.68
TM4SF1P30408 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.3■□□□□ 0.68
TM4SF1P30408 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF1P30408 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.29■□□□□ 0.68
TM4SF1P30408 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TM4SF1P30408 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.29■□□□□ 0.68
TM4SF1P30408 KRT8P14-201ENST00000414254 1442 ntBASIC19.29■□□□□ 0.68
TM4SF1P30408 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 DPM3-202ENST00000368399 517 ntBASIC19.29■□□□□ 0.68
TM4SF1P30408 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TM4SF1P30408 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TM4SF1P30408 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.29■□□□□ 0.68
TM4SF1P30408 NDUFAB1P1-201ENST00000404262 460 ntBASIC19.29■□□□□ 0.68
TM4SF1P30408 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.29■□□□□ 0.68
TM4SF1P30408 AL391280.1-201ENST00000506969 1062 ntBASIC19.29■□□□□ 0.68
TM4SF1P30408 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.29■□□□□ 0.68
TM4SF1P30408 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.29■□□□□ 0.68
TM4SF1P30408 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
TM4SF1P30408 AC079336.7-201ENST00000623428 1078 ntBASIC19.29■□□□□ 0.68
TM4SF1P30408 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.29■□□□□ 0.68
TM4SF1P30408 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 AC018695.7-201ENST00000624587 2492 ntBASIC19.29■□□□□ 0.68
TM4SF1P30408 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF1P30408 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TM4SF1P30408 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.28■□□□□ 0.68
TM4SF1P30408 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.28■□□□□ 0.68
TM4SF1P30408 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TM4SF1P30408 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.28■□□□□ 0.68
TM4SF1P30408 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TM4SF1P30408 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 AC022188.1-201ENST00000620960 1664 ntBASIC19.28■□□□□ 0.68
TM4SF1P30408 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.28■□□□□ 0.68
TM4SF1P30408 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC19.28■□□□□ 0.68
TM4SF1P30408 HIST2H2BB-201ENST00000449108 381 ntBASIC19.28■□□□□ 0.68
TM4SF1P30408 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.28■□□□□ 0.68
TM4SF1P30408 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.28■□□□□ 0.68
TM4SF1P30408 FGFR3P5-201ENST00000564496 886 ntBASIC19.28■□□□□ 0.68
TM4SF1P30408 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TM4SF1P30408 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.28■□□□□ 0.68
TM4SF1P30408 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
TM4SF1P30408 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 AC008132.1-202ENST00000342005 1389 ntBASIC19.28■□□□□ 0.68
TM4SF1P30408 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.28■□□□□ 0.68
TM4SF1P30408 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.28■□□□□ 0.68
TM4SF1P30408 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF1P30408 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.28■□□□□ 0.68
TM4SF1P30408 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TM4SF1P30408 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF1P30408 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.27■□□□□ 0.68
TM4SF1P30408 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF1P30408 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms