Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GDF1P27539 AL607033.1-201ENST00000623900 1599 ntBASIC14.34□□□□□ -0.11
GDF1P27539 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.34□□□□□ -0.11
GDF1P27539 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GDF1P27539 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.34□□□□□ -0.11
GDF1P27539 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.33□□□□□ -0.11
GDF1P27539 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.33□□□□□ -0.11
GDF1P27539 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GDF1P27539 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GDF1P27539 AC124067.4-201ENST00000519691 2379 ntBASIC14.33□□□□□ -0.11
GDF1P27539 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
GDF1P27539 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.33□□□□□ -0.11
GDF1P27539 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 AC138969.3-201ENST00000546612 1459 ntBASIC14.33□□□□□ -0.12
GDF1P27539 AC138932.2-201ENST00000548268 1459 ntBASIC14.33□□□□□ -0.12
GDF1P27539 AC126755.4-201ENST00000549796 1459 ntBASIC14.33□□□□□ -0.12
GDF1P27539 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.33□□□□□ -0.12
GDF1P27539 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.33□□□□□ -0.12
GDF1P27539 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GDF1P27539 AL139384.1-201ENST00000612143 3047 ntBASIC14.33□□□□□ -0.12
GDF1P27539 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.33□□□□□ -0.12
GDF1P27539 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.33□□□□□ -0.12
GDF1P27539 DGCR5-201ENST00000399539 862 ntBASIC14.33□□□□□ -0.12
GDF1P27539 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.33□□□□□ -0.12
GDF1P27539 AP006294.1-201ENST00000415407 339 ntBASIC14.33□□□□□ -0.12
GDF1P27539 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.33□□□□□ -0.12
GDF1P27539 KRT17P7-201ENST00000451704 1104 ntBASIC14.33□□□□□ -0.12
GDF1P27539 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.33□□□□□ -0.12
GDF1P27539 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.33□□□□□ -0.12
GDF1P27539 WASH4P-201ENST00000564273 1246 ntBASIC14.33□□□□□ -0.12
GDF1P27539 RRP7BP-205ENST00000566851 833 ntBASIC14.33□□□□□ -0.12
GDF1P27539 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.33□□□□□ -0.12
GDF1P27539 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.33□□□□□ -0.12
GDF1P27539 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 AC063926.2-201ENST00000623766 1308 ntBASIC14.33□□□□□ -0.12
GDF1P27539 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 NORAD-201ENST00000565493 5339 ntBASIC14.33□□□□□ -0.12
GDF1P27539 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
GDF1P27539 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GDF1P27539 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.33□□□□□ -0.12
GDF1P27539 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 AC099398.1-201ENST00000567919 2776 ntBASIC14.33□□□□□ -0.12
GDF1P27539 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GDF1P27539 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.33□□□□□ -0.12
GDF1P27539 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDF1P27539 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.32□□□□□ -0.12
GDF1P27539 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
GDF1P27539 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
GDF1P27539 AC126755.1-201ENST00000525846 6405 ntBASIC14.32□□□□□ -0.12
GDF1P27539 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GDF1P27539 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GDF1P27539 CLK3P2-201ENST00000427566 1453 ntBASIC14.32□□□□□ -0.12
GDF1P27539 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
GDF1P27539 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 MIR600HG-201ENST00000449175 5984 ntBASIC14.32□□□□□ -0.12
GDF1P27539 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.32□□□□□ -0.12
GDF1P27539 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
GDF1P27539 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.32□□□□□ -0.12
GDF1P27539 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 AC098614.1-201ENST00000368528 745 ntBASIC14.32□□□□□ -0.12
GDF1P27539 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GDF1P27539 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.32□□□□□ -0.12
GDF1P27539 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.32□□□□□ -0.12
GDF1P27539 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GDF1P27539 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.32□□□□□ -0.12
GDF1P27539 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 AL158212.4-201ENST00000624062 1286 ntBASIC14.32□□□□□ -0.12
GDF1P27539 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.32□□□□□ -0.12
GDF1P27539 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
GDF1P27539 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
GDF1P27539 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.32□□□□□ -0.12
GDF1P27539 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDF1P27539 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GDF1P27539 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms