Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.97■□□□□ 0.15
XPAP23025 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.97■□□□□ 0.15
XPAP23025 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 TNRC18P3-201ENST00000441896 2691 ntBASIC15.97■□□□□ 0.15
XPAP23025 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 SPTLC1P1-201ENST00000447199 261 ntBASIC15.97■□□□□ 0.15
XPAP23025 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.97■□□□□ 0.15
XPAP23025 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.97■□□□□ 0.15
XPAP23025 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
XPAP23025 AL132655.2-201ENST00000596276 594 ntBASIC15.97■□□□□ 0.15
XPAP23025 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 AC011477.6-201ENST00000604980 1927 ntBASIC15.97■□□□□ 0.15
XPAP23025 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.97■□□□□ 0.15
XPAP23025 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.97■□□□□ 0.15
XPAP23025 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.97■□□□□ 0.15
XPAP23025 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
XPAP23025 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.96■□□□□ 0.15
XPAP23025 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
XPAP23025 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
XPAP23025 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
XPAP23025 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.96■□□□□ 0.15
XPAP23025 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
XPAP23025 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
XPAP23025 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 AL035633.1-201ENST00000406139 838 ntBASIC15.96■□□□□ 0.15
XPAP23025 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 GNAQP1-201ENST00000444815 1067 ntBASIC15.96■□□□□ 0.15
XPAP23025 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.96■□□□□ 0.15
XPAP23025 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.96■□□□□ 0.15
XPAP23025 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.96■□□□□ 0.15
XPAP23025 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.96■□□□□ 0.15
XPAP23025 TPRX2P-201ENST00000535362 881 ntBASIC15.96■□□□□ 0.15
XPAP23025 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.96■□□□□ 0.15
XPAP23025 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.96■□□□□ 0.15
XPAP23025 SRD5A3P1-201ENST00000603021 949 ntBASIC15.96■□□□□ 0.15
XPAP23025 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.96■□□□□ 0.15
XPAP23025 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.96■□□□□ 0.15
XPAP23025 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
XPAP23025 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
XPAP23025 AC097376.2-205ENST00000610159 5334 ntBASIC15.96■□□□□ 0.14
XPAP23025 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.95■□□□□ 0.14
XPAP23025 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.95■□□□□ 0.14
XPAP23025 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.95■□□□□ 0.14
XPAP23025 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
XPAP23025 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
XPAP23025 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms