Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB3BP20337 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RAB3BP20337 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB3BP20337 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RAB3BP20337 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.92□□□□□ -0.18
RAB3BP20337 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB3BP20337 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RAB3BP20337 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB3BP20337 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB3BP20337 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 AC092119.3-201ENST00000612618 583 ntBASIC13.92□□□□□ -0.18
RAB3BP20337 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.92□□□□□ -0.18
RAB3BP20337 AC107918.4-202ENST00000641623 219 ntBASIC13.92□□□□□ -0.18
RAB3BP20337 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.92□□□□□ -0.18
RAB3BP20337 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB3BP20337 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 ST20-AS1-201ENST00000560255 4223 ntBASIC13.92□□□□□ -0.18
RAB3BP20337 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
RAB3BP20337 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.92□□□□□ -0.18
RAB3BP20337 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RAB3BP20337 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB3BP20337 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB3BP20337 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RAB3BP20337 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB3BP20337 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.91□□□□□ -0.18
RAB3BP20337 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB3BP20337 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB3BP20337 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RAB3BP20337 KRT18P34-201ENST00000488218 1270 ntBASIC13.91□□□□□ -0.18
RAB3BP20337 FOSL1P1-201ENST00000511041 816 ntBASIC13.91□□□□□ -0.18
RAB3BP20337 AC136632.2-201ENST00000512891 861 ntBASIC13.91□□□□□ -0.18
RAB3BP20337 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB3BP20337 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.91□□□□□ -0.18
RAB3BP20337 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB3BP20337 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB3BP20337 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB3BP20337 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RAB3BP20337 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
RAB3BP20337 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RAB3BP20337 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB3BP20337 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB3BP20337 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB3BP20337 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RAB3BP20337 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB3BP20337 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RAB3BP20337 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB3BP20337 AL137784.3-201ENST00000623858 2288 ntBASIC13.9□□□□□ -0.18
RAB3BP20337 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RAB3BP20337 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
RAB3BP20337 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB3BP20337 AL589702.1-201ENST00000641229 1509 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms