Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CFTRP13569 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CFTRP13569 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CFTRP13569 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CFTRP13569 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
CFTRP13569 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC26.33■■□□□ 1.81
CFTRP13569 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC26.33■■□□□ 1.8
CFTRP13569 AC124067.4-201ENST00000519691 2379 ntBASIC26.33■■□□□ 1.8
CFTRP13569 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC26.32■■□□□ 1.8
CFTRP13569 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
CFTRP13569 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC26.32■■□□□ 1.8
CFTRP13569 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC26.32■■□□□ 1.8
CFTRP13569 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC26.32■■□□□ 1.8
CFTRP13569 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC26.32■■□□□ 1.8
CFTRP13569 PAM16-211ENST00000575848 518 ntTSL 3 BASIC26.32■■□□□ 1.8
CFTRP13569 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CFTRP13569 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC26.32■■□□□ 1.8
CFTRP13569 AC092171.5-201ENST00000608012 942 ntBASIC26.32■■□□□ 1.8
CFTRP13569 MEG3_2.1-201ENST00000611456 105 ntBASIC26.32■■□□□ 1.8
CFTRP13569 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC26.32■■□□□ 1.8
CFTRP13569 AL136295.7-201ENST00000619226 1200 ntBASIC26.32■■□□□ 1.8
CFTRP13569 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
CFTRP13569 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC26.32■■□□□ 1.8
CFTRP13569 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CFTRP13569 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CFTRP13569 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFTRP13569 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFTRP13569 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFTRP13569 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CFTRP13569 RN7SL8P-201ENST00000461771 266 ntBASIC26.31■■□□□ 1.8
CFTRP13569 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC26.31■■□□□ 1.8
CFTRP13569 NEU3-205ENST00000531619 582 ntTSL 5 BASIC26.31■■□□□ 1.8
CFTRP13569 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC26.31■■□□□ 1.8
CFTRP13569 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFTRP13569 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC26.31■■□□□ 1.8
CFTRP13569 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC26.31■■□□□ 1.8
CFTRP13569 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC26.31■■□□□ 1.8
CFTRP13569 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFTRP13569 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFTRP13569 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CFTRP13569 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFTRP13569 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFTRP13569 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC26.31■■□□□ 1.8
CFTRP13569 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC26.31■■□□□ 1.8
CFTRP13569 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC26.31■■□□□ 1.8
CFTRP13569 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CFTRP13569 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC26.3■■□□□ 1.8
CFTRP13569 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 AC078991.1-201ENST00000437297 610 ntBASIC26.3■■□□□ 1.8
CFTRP13569 RPL18P13-201ENST00000478088 569 ntBASIC26.3■■□□□ 1.8
CFTRP13569 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 IGLV3-15-201ENST00000518356 244 ntBASIC26.3■■□□□ 1.8
CFTRP13569 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC26.3■■□□□ 1.8
CFTRP13569 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC26.3■■□□□ 1.8
CFTRP13569 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC26.3■■□□□ 1.8
CFTRP13569 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC26.3■■□□□ 1.8
CFTRP13569 AC132192.2-201ENST00000596206 1147 ntBASIC26.3■■□□□ 1.8
CFTRP13569 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CFTRP13569 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CFTRP13569 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 AC018470.1-201ENST00000624790 3129 ntBASIC26.3■■□□□ 1.8
CFTRP13569 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC26.3■■□□□ 1.8
CFTRP13569 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CFTRP13569 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CFTRP13569 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
CFTRP13569 SHC1P1-201ENST00000425230 1745 ntBASIC26.29■■□□□ 1.8
CFTRP13569 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC26.29■■□□□ 1.8
CFTRP13569 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFTRP13569 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CFTRP13569 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC26.29■■□□□ 1.8
CFTRP13569 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CFTRP13569 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFTRP13569 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC26.29■■□□□ 1.8
CFTRP13569 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC26.29■■□□□ 1.8
CFTRP13569 IRF3-215ENST00000596822 823 ntTSL 3 BASIC26.29■■□□□ 1.8
CFTRP13569 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
CFTRP13569 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CFTRP13569 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms