Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
KRT3P12035 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 CNN2P2-201ENST00000443536 909 ntBASIC16.68■□□□□ 0.26
KRT3P12035 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 CNN2P3-201ENST00000450201 906 ntBASIC16.68■□□□□ 0.26
KRT3P12035 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT3P12035 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 AL136317.3-201ENST00000618497 906 ntBASIC16.68■□□□□ 0.26
KRT3P12035 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.68■□□□□ 0.26
KRT3P12035 AC073347.1-201ENST00000421633 2643 ntBASIC16.68■□□□□ 0.26
KRT3P12035 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
KRT3P12035 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT3P12035 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
KRT3P12035 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT3P12035 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT3P12035 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.68■□□□□ 0.26
KRT3P12035 TUBB3P1-201ENST00000405796 1332 ntBASIC16.68■□□□□ 0.26
KRT3P12035 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KRT3P12035 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KRT3P12035 AC022532.1-201ENST00000624563 1728 ntBASIC16.67■□□□□ 0.26
KRT3P12035 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT3P12035 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 AC087481.3-201ENST00000602886 1894 ntBASIC16.67■□□□□ 0.26
KRT3P12035 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KRT3P12035 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT3P12035 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
KRT3P12035 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 AC090616.6-203ENST00000579186 1945 ntBASIC16.67■□□□□ 0.26
KRT3P12035 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
KRT3P12035 AC136604.1-201ENST00000418535 575 ntBASIC16.67■□□□□ 0.26
KRT3P12035 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT3P12035 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
KRT3P12035 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT3P12035 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT3P12035 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.67■□□□□ 0.26
KRT3P12035 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT3P12035 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT3P12035 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KRT3P12035 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
KRT3P12035 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT3P12035 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.67■□□□□ 0.26
KRT3P12035 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
KRT3P12035 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.67■□□□□ 0.26
KRT3P12035 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KRT3P12035 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT3P12035 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KRT3P12035 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KRT3P12035 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT3P12035 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
KRT3P12035 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT3P12035 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
KRT3P12035 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
KRT3P12035 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT3P12035 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.66■□□□□ 0.26
KRT3P12035 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.66■□□□□ 0.26
KRT3P12035 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT3P12035 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.66■□□□□ 0.26
KRT3P12035 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.66■□□□□ 0.26
KRT3P12035 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KRT3P12035 AL607033.1-201ENST00000623900 1599 ntBASIC16.66■□□□□ 0.26
KRT3P12035 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms