Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.39□□□□□ -0.43
CD28P10747 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.39□□□□□ -0.43
CD28P10747 PCDHB19P-201ENST00000570871 2371 ntBASIC12.38□□□□□ -0.43
CD28P10747 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
CD28P10747 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
CD28P10747 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CD28P10747 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CD28P10747 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
CD28P10747 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CD28P10747 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.38□□□□□ -0.43
CD28P10747 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.38□□□□□ -0.43
CD28P10747 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CD28P10747 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 MIR658-201ENST00000385210 100 ntBASIC12.38□□□□□ -0.43
CD28P10747 MIR1909-201ENST00000411312 80 ntBASIC12.38□□□□□ -0.43
CD28P10747 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.38□□□□□ -0.43
CD28P10747 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.38□□□□□ -0.43
CD28P10747 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CD28P10747 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 AC079328.2-201ENST00000561241 3354 ntBASIC12.38□□□□□ -0.43
CD28P10747 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CD28P10747 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.38□□□□□ -0.43
CD28P10747 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 AGGF1P2-201ENST00000426656 2106 ntBASIC12.38□□□□□ -0.43
CD28P10747 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.38□□□□□ -0.43
CD28P10747 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CD28P10747 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD28P10747 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CD28P10747 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CD28P10747 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CD28P10747 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.37□□□□□ -0.43
CD28P10747 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.37□□□□□ -0.43
CD28P10747 TARDBPP1-201ENST00000442013 1203 ntBASIC12.37□□□□□ -0.43
CD28P10747 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 AC007389.4-201ENST00000454674 793 ntBASIC12.37□□□□□ -0.43
CD28P10747 RN7SL399P-201ENST00000471648 279 ntBASIC12.37□□□□□ -0.43
CD28P10747 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.37□□□□□ -0.43
CD28P10747 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.37□□□□□ -0.43
CD28P10747 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.37□□□□□ -0.43
CD28P10747 AC092552.1-201ENST00000547243 906 ntBASIC12.37□□□□□ -0.43
CD28P10747 AC036164.1-201ENST00000570544 333 ntBASIC12.37□□□□□ -0.43
CD28P10747 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CD28P10747 MIR6805-201ENST00000615055 62 ntBASIC12.37□□□□□ -0.43
CD28P10747 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.37□□□□□ -0.43
CD28P10747 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.37□□□□□ -0.43
CD28P10747 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 FLJ38576-201ENST00000623820 2459 ntBASIC12.37□□□□□ -0.43
CD28P10747 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.37□□□□□ -0.43
CD28P10747 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CD28P10747 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
CD28P10747 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms