Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.86■□□□□ 0.13
MMP2P08253 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.86■□□□□ 0.13
MMP2P08253 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.86■□□□□ 0.13
MMP2P08253 RNA5SP421-201ENST00000516864 134 ntBASIC15.86■□□□□ 0.13
MMP2P08253 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.86■□□□□ 0.13
MMP2P08253 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.86■□□□□ 0.13
MMP2P08253 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
MMP2P08253 AL391069.4-201ENST00000609583 481 ntBASIC15.86■□□□□ 0.13
MMP2P08253 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
MMP2P08253 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MMP2P08253 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.86■□□□□ 0.13
MMP2P08253 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.86■□□□□ 0.13
MMP2P08253 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
MMP2P08253 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
MMP2P08253 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.86■□□□□ 0.13
MMP2P08253 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.85■□□□□ 0.13
MMP2P08253 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 AC104640.1-201ENST00000562617 2109 ntBASIC15.85■□□□□ 0.13
MMP2P08253 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
MMP2P08253 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
MMP2P08253 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.85■□□□□ 0.13
MMP2P08253 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
MMP2P08253 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.85■□□□□ 0.13
MMP2P08253 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.85■□□□□ 0.13
MMP2P08253 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 INGX-202ENST00000489074 768 ntBASIC15.85■□□□□ 0.13
MMP2P08253 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.85■□□□□ 0.13
MMP2P08253 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.85■□□□□ 0.13
MMP2P08253 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.85■□□□□ 0.13
MMP2P08253 AC104794.3-201ENST00000566840 1248 ntBASIC15.85■□□□□ 0.13
MMP2P08253 AC015910.1-201ENST00000579400 975 ntBASIC15.85■□□□□ 0.13
MMP2P08253 AL355385.1-201ENST00000606123 409 ntBASIC15.85■□□□□ 0.13
MMP2P08253 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.85■□□□□ 0.13
MMP2P08253 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.85■□□□□ 0.13
MMP2P08253 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.85■□□□□ 0.13
MMP2P08253 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.85■□□□□ 0.13
MMP2P08253 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
MMP2P08253 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.85■□□□□ 0.13
MMP2P08253 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
MMP2P08253 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MMP2P08253 C18orf15-201ENST00000623680 2534 ntBASIC15.85■□□□□ 0.13
MMP2P08253 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.85■□□□□ 0.13
MMP2P08253 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
MMP2P08253 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP2P08253 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP2P08253 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
MMP2P08253 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
MMP2P08253 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
MMP2P08253 MIR661-201ENST00000384842 89 ntBASIC15.84■□□□□ 0.13
MMP2P08253 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.84■□□□□ 0.13
MMP2P08253 BCRP1-201ENST00000444246 691 ntBASIC15.84■□□□□ 0.13
MMP2P08253 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.84■□□□□ 0.13
MMP2P08253 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP2P08253 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
MMP2P08253 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
MMP2P08253 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.84■□□□□ 0.13
MMP2P08253 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms