Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.93■□□□□ 0.14
RETP07949 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.93■□□□□ 0.14
RETP07949 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RETP07949 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RETP07949 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.93■□□□□ 0.14
RETP07949 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.93■□□□□ 0.14
RETP07949 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 SLC25A24P2-201ENST00000415059 510 ntBASIC15.93■□□□□ 0.14
RETP07949 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.93■□□□□ 0.14
RETP07949 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 AL355864.2-201ENST00000447420 863 ntBASIC15.93■□□□□ 0.14
RETP07949 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.93■□□□□ 0.14
RETP07949 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.93■□□□□ 0.14
RETP07949 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.93■□□□□ 0.14
RETP07949 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.93■□□□□ 0.14
RETP07949 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.93■□□□□ 0.14
RETP07949 ENPP7P5-201ENST00000541031 1031 ntBASIC15.93■□□□□ 0.14
RETP07949 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.93■□□□□ 0.14
RETP07949 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.93■□□□□ 0.14
RETP07949 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.93■□□□□ 0.14
RETP07949 AC091271.1-201ENST00000611877 1162 ntBASIC15.93■□□□□ 0.14
RETP07949 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RETP07949 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.93■□□□□ 0.14
RETP07949 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.93■□□□□ 0.14
RETP07949 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.93■□□□□ 0.14
RETP07949 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.93■□□□□ 0.14
RETP07949 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
RETP07949 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RETP07949 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.93■□□□□ 0.14
RETP07949 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RETP07949 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RETP07949 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
RETP07949 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.92■□□□□ 0.14
RETP07949 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.92■□□□□ 0.14
RETP07949 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.92■□□□□ 0.14
RETP07949 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RETP07949 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.92■□□□□ 0.14
RETP07949 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 AC006033.1-201ENST00000440505 426 ntBASIC15.92■□□□□ 0.14
RETP07949 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.92■□□□□ 0.14
RETP07949 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
RETP07949 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RETP07949 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.92■□□□□ 0.14
RETP07949 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.92■□□□□ 0.14
RETP07949 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.92■□□□□ 0.14
RETP07949 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.92■□□□□ 0.14
RETP07949 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.92■□□□□ 0.14
RETP07949 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RETP07949 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
RETP07949 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RETP07949 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
RETP07949 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.92■□□□□ 0.14
RETP07949 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RETP07949 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.91■□□□□ 0.14
RETP07949 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.91■□□□□ 0.14
RETP07949 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
RETP07949 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RETP07949 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.91■□□□□ 0.14
RETP07949 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RETP07949 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
RETP07949 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms