Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL023803.2-201ENST00000620080 638 ntBASIC16.83■□□□□ 0.28
TIMP1P01033 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TIMP1P01033 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP1P01033 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TIMP1P01033 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TIMP1P01033 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.82■□□□□ 0.28
TIMP1P01033 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TIMP1P01033 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.82■□□□□ 0.28
TIMP1P01033 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TIMP1P01033 AC011477.6-201ENST00000604980 1927 ntBASIC16.82■□□□□ 0.28
TIMP1P01033 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TIMP1P01033 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 KRT8P4-201ENST00000509735 1454 ntBASIC16.82■□□□□ 0.28
TIMP1P01033 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 DPM3-202ENST00000368399 517 ntBASIC16.82■□□□□ 0.28
TIMP1P01033 AL645937.2-201ENST00000396808 931 ntBASIC16.82■□□□□ 0.28
TIMP1P01033 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 AC007274.2-201ENST00000421675 662 ntBASIC16.82■□□□□ 0.28
TIMP1P01033 AL596276.2-201ENST00000447525 331 ntBASIC16.82■□□□□ 0.28
TIMP1P01033 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMP1P01033 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.82■□□□□ 0.28
TIMP1P01033 AC025181.2-201ENST00000606994 802 ntBASIC16.82■□□□□ 0.28
TIMP1P01033 AC022748.3-201ENST00000621828 275 ntBASIC16.82■□□□□ 0.28
TIMP1P01033 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.82■□□□□ 0.28
TIMP1P01033 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TIMP1P01033 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TIMP1P01033 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.82■□□□□ 0.28
TIMP1P01033 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMP1P01033 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.82■□□□□ 0.28
TIMP1P01033 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TIMP1P01033 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMP1P01033 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 KRT8P29-201ENST00000420409 1371 ntBASIC16.81■□□□□ 0.28
TIMP1P01033 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMP1P01033 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.81■□□□□ 0.28
TIMP1P01033 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMP1P01033 CHMP1AP1-201ENST00000445563 662 ntBASIC16.81■□□□□ 0.28
TIMP1P01033 HIST2H2BB-201ENST00000449108 381 ntBASIC16.81■□□□□ 0.28
TIMP1P01033 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMP1P01033 AC012618.1-201ENST00000461223 412 ntBASIC16.81■□□□□ 0.28
TIMP1P01033 AC021723.1-201ENST00000486306 515 ntBASIC16.81■□□□□ 0.28
TIMP1P01033 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.81■□□□□ 0.28
TIMP1P01033 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.81■□□□□ 0.28
TIMP1P01033 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.81■□□□□ 0.28
TIMP1P01033 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 AC100850.1-201ENST00000506768 649 ntBASIC16.81■□□□□ 0.28
TIMP1P01033 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.81■□□□□ 0.28
TIMP1P01033 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMP1P01033 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.81■□□□□ 0.28
TIMP1P01033 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.81■□□□□ 0.28
TIMP1P01033 MIR4313-201ENST00000580760 101 ntBASIC16.81■□□□□ 0.28
TIMP1P01033 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMP1P01033 AC018635.2-201ENST00000608625 364 ntBASIC16.81■□□□□ 0.28
TIMP1P01033 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMP1P01033 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMP1P01033 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMP1P01033 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.81■□□□□ 0.28
TIMP1P01033 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.81■□□□□ 0.28
TIMP1P01033 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TIMP1P01033 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TIMP1P01033 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.8■□□□□ 0.28
TIMP1P01033 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TIMP1P01033 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms