Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.96□□□□□ -0.01
SNX4O95219 RFPL4AP1-201ENST00000530883 850 ntBASIC14.96□□□□□ -0.01
SNX4O95219 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.96□□□□□ -0.01
SNX4O95219 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.96□□□□□ -0.01
SNX4O95219 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.96□□□□□ -0.01
SNX4O95219 AC027796.2-201ENST00000575326 344 ntBASIC14.96□□□□□ -0.01
SNX4O95219 AC024267.1-201ENST00000582320 895 ntBASIC14.96□□□□□ -0.01
SNX4O95219 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.96□□□□□ -0.01
SNX4O95219 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 AP3S2-216ENST00000617003 1561 ntBASIC14.96□□□□□ -0.01
SNX4O95219 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.96□□□□□ -0.01
SNX4O95219 U82695.1-201ENST00000635752 1889 ntBASIC14.96□□□□□ -0.01
SNX4O95219 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.96□□□□□ -0.01
SNX4O95219 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.96□□□□□ -0.01
SNX4O95219 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SNX4O95219 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
SNX4O95219 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SNX4O95219 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SNX4O95219 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SNX4O95219 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SNX4O95219 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.96□□□□□ -0.02
SNX4O95219 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.96□□□□□ -0.02
SNX4O95219 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
SNX4O95219 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.95□□□□□ -0.02
SNX4O95219 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.95□□□□□ -0.02
SNX4O95219 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 CICP13-201ENST00000422015 2789 ntBASIC14.95□□□□□ -0.02
SNX4O95219 AC010491.1-201ENST00000563101 2797 ntBASIC14.95□□□□□ -0.02
SNX4O95219 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.95□□□□□ -0.02
SNX4O95219 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.95□□□□□ -0.02
SNX4O95219 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SNX4O95219 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SNX4O95219 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.95□□□□□ -0.02
SNX4O95219 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.95□□□□□ -0.02
SNX4O95219 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.95□□□□□ -0.02
SNX4O95219 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 AC018529.1-201ENST00000613063 361 ntBASIC14.95□□□□□ -0.02
SNX4O95219 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.95□□□□□ -0.02
SNX4O95219 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
SNX4O95219 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.95□□□□□ -0.02
SNX4O95219 Z92544.3-201ENST00000624747 417 ntBASIC14.95□□□□□ -0.02
SNX4O95219 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.95□□□□□ -0.02
SNX4O95219 FOXO1B-201ENST00000504678 1527 ntBASIC14.95□□□□□ -0.02
SNX4O95219 AL589702.1-201ENST00000641229 1509 ntBASIC14.95□□□□□ -0.02
SNX4O95219 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SNX4O95219 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SNX4O95219 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SNX4O95219 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX4O95219 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SNX4O95219 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SNX4O95219 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SNX4O95219 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SNX4O95219 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX4O95219 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.94□□□□□ -0.02
SNX4O95219 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.94□□□□□ -0.02
SNX4O95219 MIR6080-201ENST00000617359 66 ntBASIC14.94□□□□□ -0.02
SNX4O95219 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.94□□□□□ -0.02
SNX4O95219 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SNX4O95219 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms