Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLSTN1O94985 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLSTN1O94985 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC17.62■□□□□ 0.41
CLSTN1O94985 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CLSTN1O94985 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.62■□□□□ 0.41
CLSTN1O94985 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.62■□□□□ 0.41
CLSTN1O94985 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.62■□□□□ 0.41
CLSTN1O94985 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.62■□□□□ 0.41
CLSTN1O94985 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.62■□□□□ 0.41
CLSTN1O94985 AC023141.5-201ENST00000458585 616 ntBASIC17.62■□□□□ 0.41
CLSTN1O94985 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.62■□□□□ 0.41
CLSTN1O94985 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.62■□□□□ 0.41
CLSTN1O94985 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.62■□□□□ 0.41
CLSTN1O94985 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.62■□□□□ 0.41
CLSTN1O94985 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.62■□□□□ 0.41
CLSTN1O94985 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.62■□□□□ 0.41
CLSTN1O94985 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.62■□□□□ 0.41
CLSTN1O94985 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.62■□□□□ 0.41
CLSTN1O94985 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.62■□□□□ 0.41
CLSTN1O94985 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.62■□□□□ 0.41
CLSTN1O94985 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLSTN1O94985 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.61■□□□□ 0.41
CLSTN1O94985 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
CLSTN1O94985 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLSTN1O94985 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLSTN1O94985 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLSTN1O94985 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.61■□□□□ 0.41
CLSTN1O94985 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.61■□□□□ 0.41
CLSTN1O94985 AL627223.1-201ENST00000416693 442 ntBASIC17.61■□□□□ 0.41
CLSTN1O94985 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLSTN1O94985 AP006288.1-201ENST00000446065 395 ntBASIC17.61■□□□□ 0.41
CLSTN1O94985 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.61■□□□□ 0.41
CLSTN1O94985 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLSTN1O94985 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.61■□□□□ 0.41
CLSTN1O94985 AP000842.3-202ENST00000569238 1080 ntBASIC17.61■□□□□ 0.41
CLSTN1O94985 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.61■□□□□ 0.41
CLSTN1O94985 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.61■□□□□ 0.41
CLSTN1O94985 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CLSTN1O94985 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.61■□□□□ 0.41
CLSTN1O94985 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLSTN1O94985 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLSTN1O94985 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CLSTN1O94985 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.6■□□□□ 0.41
CLSTN1O94985 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 PRAL-201ENST00000624952 3286 ntBASIC17.6■□□□□ 0.41
CLSTN1O94985 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLSTN1O94985 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLSTN1O94985 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CLSTN1O94985 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.6■□□□□ 0.41
CLSTN1O94985 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.6■□□□□ 0.41
CLSTN1O94985 RBPMS2P1-201ENST00000437762 623 ntBASIC17.6■□□□□ 0.41
CLSTN1O94985 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.6■□□□□ 0.41
CLSTN1O94985 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLSTN1O94985 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CLSTN1O94985 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.6■□□□□ 0.41
CLSTN1O94985 SPTSSB-204ENST00000617024 1292 ntBASIC17.6■□□□□ 0.41
CLSTN1O94985 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.6■□□□□ 0.41
CLSTN1O94985 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CLSTN1O94985 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.6■□□□□ 0.41
CLSTN1O94985 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.6■□□□□ 0.41
CLSTN1O94985 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLSTN1O94985 AC006058.4-201ENST00000624016 1670 ntBASIC17.6■□□□□ 0.41
CLSTN1O94985 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms