Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM3O75382 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.83□□□□□ -0.04
TRIM3O75382 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRIM3O75382 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 TNRC18P2-201ENST00000417666 2714 ntBASIC14.83□□□□□ -0.04
TRIM3O75382 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM3O75382 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRIM3O75382 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM3O75382 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM3O75382 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM3O75382 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM3O75382 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM3O75382 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM3O75382 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM3O75382 AC097493.3-201ENST00000509725 367 ntBASIC14.82□□□□□ -0.04
TRIM3O75382 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM3O75382 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM3O75382 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.82□□□□□ -0.04
TRIM3O75382 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.82□□□□□ -0.04
TRIM3O75382 AC105021.1-202ENST00000570572 669 ntBASIC14.82□□□□□ -0.04
TRIM3O75382 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM3O75382 AL365330.1-201ENST00000607459 531 ntBASIC14.82□□□□□ -0.04
TRIM3O75382 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM3O75382 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM3O75382 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM3O75382 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM3O75382 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM3O75382 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM3O75382 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM3O75382 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRIM3O75382 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM3O75382 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM3O75382 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM3O75382 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM3O75382 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 AL009178.2-201ENST00000597278 2719 ntBASIC14.81□□□□□ -0.04
TRIM3O75382 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.81□□□□□ -0.04
TRIM3O75382 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRIM3O75382 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 AC092580.3-201ENST00000430932 139 ntBASIC14.81□□□□□ -0.04
TRIM3O75382 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.81□□□□□ -0.04
TRIM3O75382 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.81□□□□□ -0.04
TRIM3O75382 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.81□□□□□ -0.04
TRIM3O75382 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRIM3O75382 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms