Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC000095.1-201ENST00000603208 874 ntBASIC14.17□□□□□ -0.14
ZIC3O60481 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.17□□□□□ -0.14
ZIC3O60481 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ZIC3O60481 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.17□□□□□ -0.14
ZIC3O60481 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.17□□□□□ -0.14
ZIC3O60481 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.17□□□□□ -0.14
ZIC3O60481 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
ZIC3O60481 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.17□□□□□ -0.14
ZIC3O60481 AC127383.1-201ENST00000444697 1800 ntBASIC14.17□□□□□ -0.14
ZIC3O60481 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
ZIC3O60481 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.17□□□□□ -0.14
ZIC3O60481 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.17□□□□□ -0.14
ZIC3O60481 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.17□□□□□ -0.14
ZIC3O60481 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ZIC3O60481 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZIC3O60481 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.16□□□□□ -0.14
ZIC3O60481 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.16□□□□□ -0.14
ZIC3O60481 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.16□□□□□ -0.14
ZIC3O60481 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.16□□□□□ -0.14
ZIC3O60481 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.16□□□□□ -0.14
ZIC3O60481 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ZIC3O60481 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.16□□□□□ -0.14
ZIC3O60481 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.16□□□□□ -0.14
ZIC3O60481 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ZIC3O60481 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 AC104596.2-201ENST00000512793 793 ntBASIC14.16□□□□□ -0.14
ZIC3O60481 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.16□□□□□ -0.14
ZIC3O60481 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.16□□□□□ -0.14
ZIC3O60481 AC092552.1-201ENST00000547243 906 ntBASIC14.16□□□□□ -0.14
ZIC3O60481 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.16□□□□□ -0.14
ZIC3O60481 AC015910.1-201ENST00000579400 975 ntBASIC14.16□□□□□ -0.14
ZIC3O60481 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
ZIC3O60481 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.16□□□□□ -0.14
ZIC3O60481 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.16□□□□□ -0.14
ZIC3O60481 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 AL139384.1-201ENST00000612143 3047 ntBASIC14.16□□□□□ -0.14
ZIC3O60481 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ZIC3O60481 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
ZIC3O60481 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ZIC3O60481 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ZIC3O60481 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.15□□□□□ -0.14
ZIC3O60481 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.15□□□□□ -0.14
ZIC3O60481 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms