Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.32□□□□□ -0.44
PDE6DO43924 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PDE6DO43924 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.32□□□□□ -0.44
PDE6DO43924 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.32□□□□□ -0.44
PDE6DO43924 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 AL359183.1-201ENST00000623796 2132 ntBASIC12.32□□□□□ -0.44
PDE6DO43924 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PDE6DO43924 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 AC127383.1-201ENST00000444697 1800 ntBASIC12.32□□□□□ -0.44
PDE6DO43924 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PDE6DO43924 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.32□□□□□ -0.44
PDE6DO43924 AC015656.1-201ENST00000624209 3578 ntBASIC12.31□□□□□ -0.44
PDE6DO43924 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
PDE6DO43924 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PDE6DO43924 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
PDE6DO43924 AL359881.3-201ENST00000602640 1721 ntBASIC12.31□□□□□ -0.44
PDE6DO43924 PI4KAP1-204ENST00000612579 1703 ntBASIC12.31□□□□□ -0.44
PDE6DO43924 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PDE6DO43924 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
PDE6DO43924 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 HSPA7-201ENST00000445535 1927 ntBASIC12.31□□□□□ -0.44
PDE6DO43924 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
PDE6DO43924 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
PDE6DO43924 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
PDE6DO43924 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.31□□□□□ -0.44
PDE6DO43924 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.31□□□□□ -0.44
PDE6DO43924 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.31□□□□□ -0.44
PDE6DO43924 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
PDE6DO43924 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.31□□□□□ -0.44
PDE6DO43924 AP005901.3-202ENST00000581653 237 ntBASIC12.31□□□□□ -0.44
PDE6DO43924 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.31□□□□□ -0.44
PDE6DO43924 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 Z69720.1-201ENST00000601483 472 ntBASIC12.31□□□□□ -0.44
PDE6DO43924 AC114341.1-201ENST00000618070 349 ntBASIC12.31□□□□□ -0.44
PDE6DO43924 AL589182.2-201ENST00000619332 1049 ntBASIC12.31□□□□□ -0.44
PDE6DO43924 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.31□□□□□ -0.44
PDE6DO43924 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.31□□□□□ -0.44
PDE6DO43924 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.31□□□□□ -0.44
PDE6DO43924 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.31□□□□□ -0.44
PDE6DO43924 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
PDE6DO43924 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PDE6DO43924 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PDE6DO43924 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PDE6DO43924 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
PDE6DO43924 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDE6DO43924 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDE6DO43924 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.3□□□□□ -0.44
PDE6DO43924 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.3□□□□□ -0.44
PDE6DO43924 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.3□□□□□ -0.44
PDE6DO43924 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
PDE6DO43924 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.3□□□□□ -0.44
PDE6DO43924 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDE6DO43924 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PDE6DO43924 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDE6DO43924 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDE6DO43924 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
PDE6DO43924 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
PDE6DO43924 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDE6DO43924 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
PDE6DO43924 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.3□□□□□ -0.44
PDE6DO43924 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC12.3□□□□□ -0.44
PDE6DO43924 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PDE6DO43924 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
PDE6DO43924 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms