Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PHGDHO43175 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PHGDHO43175 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.79■□□□□ 0.12
PHGDHO43175 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
PHGDHO43175 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PHGDHO43175 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.78■□□□□ 0.12
PHGDHO43175 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PHGDHO43175 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.78■□□□□ 0.12
PHGDHO43175 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PHGDHO43175 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.78■□□□□ 0.12
PHGDHO43175 PGAM5P1-201ENST00000518923 814 ntBASIC15.78■□□□□ 0.12
PHGDHO43175 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 SLC25A39P2-201ENST00000537614 270 ntBASIC15.78■□□□□ 0.12
PHGDHO43175 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.78■□□□□ 0.12
PHGDHO43175 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
PHGDHO43175 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PHGDHO43175 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PHGDHO43175 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PHGDHO43175 UXT-AS1-201ENST00000590504 1525 ntBASIC15.78■□□□□ 0.12
PHGDHO43175 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PHGDHO43175 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.78■□□□□ 0.12
PHGDHO43175 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHGDHO43175 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHGDHO43175 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHGDHO43175 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHGDHO43175 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.77■□□□□ 0.12
PHGDHO43175 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.77■□□□□ 0.12
PHGDHO43175 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.77■□□□□ 0.12
PHGDHO43175 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHGDHO43175 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.77■□□□□ 0.12
PHGDHO43175 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PHGDHO43175 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHGDHO43175 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PHGDHO43175 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.77■□□□□ 0.12
PHGDHO43175 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.77■□□□□ 0.12
PHGDHO43175 ALG1L5P-201ENST00000482043 771 ntBASIC15.77■□□□□ 0.12
PHGDHO43175 AC069335.1-201ENST00000489972 472 ntBASIC15.77■□□□□ 0.12
PHGDHO43175 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHGDHO43175 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.77■□□□□ 0.12
PHGDHO43175 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.77■□□□□ 0.12
PHGDHO43175 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.77■□□□□ 0.12
PHGDHO43175 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.77■□□□□ 0.12
PHGDHO43175 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.77■□□□□ 0.12
PHGDHO43175 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.77■□□□□ 0.12
PHGDHO43175 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
PHGDHO43175 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.77■□□□□ 0.12
PHGDHO43175 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PHGDHO43175 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PHGDHO43175 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PHGDHO43175 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.77■□□□□ 0.11
PHGDHO43175 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PHGDHO43175 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.77■□□□□ 0.11
PHGDHO43175 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.77■□□□□ 0.11
PHGDHO43175 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.77■□□□□ 0.11
PHGDHO43175 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
PHGDHO43175 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PHGDHO43175 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms