Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.76■□□□□ 0.91
APAF1O14727 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.76■□□□□ 0.91
APAF1O14727 SRD5A3P1-201ENST00000603021 949 ntBASIC20.76■□□□□ 0.91
APAF1O14727 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC20.76■□□□□ 0.91
APAF1O14727 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APAF1O14727 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APAF1O14727 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.76■□□□□ 0.91
APAF1O14727 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
APAF1O14727 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.75■□□□□ 0.91
APAF1O14727 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
APAF1O14727 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
APAF1O14727 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.75■□□□□ 0.91
APAF1O14727 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.75■□□□□ 0.91
APAF1O14727 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.75■□□□□ 0.91
APAF1O14727 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.75■□□□□ 0.91
APAF1O14727 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.75■□□□□ 0.91
APAF1O14727 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.75■□□□□ 0.91
APAF1O14727 AL096865.1-201ENST00000606796 927 ntBASIC20.75■□□□□ 0.91
APAF1O14727 AJ011932.1-201ENST00000621707 465 ntBASIC20.75■□□□□ 0.91
APAF1O14727 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.75■□□□□ 0.91
APAF1O14727 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
APAF1O14727 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.75■□□□□ 0.91
APAF1O14727 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.75■□□□□ 0.91
APAF1O14727 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
APAF1O14727 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.75■□□□□ 0.91
APAF1O14727 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.75■□□□□ 0.91
APAF1O14727 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
APAF1O14727 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
APAF1O14727 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 TOMM22P5-201ENST00000416399 439 ntBASIC20.74■□□□□ 0.91
APAF1O14727 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.74■□□□□ 0.91
APAF1O14727 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 GNAQP1-201ENST00000444815 1067 ntBASIC20.74■□□□□ 0.91
APAF1O14727 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 STK33-217ENST00000534493 1895 ntTSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.74■□□□□ 0.91
APAF1O14727 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.74■□□□□ 0.91
APAF1O14727 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.74■□□□□ 0.91
APAF1O14727 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.74■□□□□ 0.91
APAF1O14727 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
APAF1O14727 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.74■□□□□ 0.91
APAF1O14727 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APAF1O14727 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.74■□□□□ 0.91
APAF1O14727 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC20.73■□□□□ 0.91
APAF1O14727 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APAF1O14727 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APAF1O14727 AC087481.3-201ENST00000602886 1894 ntBASIC20.73■□□□□ 0.91
APAF1O14727 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APAF1O14727 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APAF1O14727 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.73■□□□□ 0.91
APAF1O14727 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
APAF1O14727 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APAF1O14727 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC20.73■□□□□ 0.91
APAF1O14727 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
APAF1O14727 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APAF1O14727 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
APAF1O14727 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.73■□□□□ 0.91
APAF1O14727 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms