Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL21O00585 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL21O00585 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.84□□□□□ -0.19
CCL21O00585 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CCL21O00585 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CCL21O00585 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.84□□□□□ -0.19
CCL21O00585 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCL21O00585 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
CCL21O00585 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
CCL21O00585 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL21O00585 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL21O00585 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL21O00585 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCL21O00585 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL21O00585 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL21O00585 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL21O00585 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCL21O00585 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.83□□□□□ -0.2
CCL21O00585 AL133267.1-201ENST00000398220 340 ntBASIC13.83□□□□□ -0.2
CCL21O00585 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL21O00585 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CCL21O00585 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL21O00585 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL21O00585 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL21O00585 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL21O00585 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL21O00585 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.83□□□□□ -0.2
CCL21O00585 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.83□□□□□ -0.2
CCL21O00585 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.83□□□□□ -0.2
CCL21O00585 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL21O00585 AL008638.5-201ENST00000623814 1298 ntBASIC13.83□□□□□ -0.2
CCL21O00585 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL21O00585 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL21O00585 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL21O00585 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL21O00585 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL21O00585 KRT8P35-201ENST00000483942 1338 ntBASIC13.83□□□□□ -0.2
CCL21O00585 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL21O00585 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.83□□□□□ -0.2
CCL21O00585 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.83□□□□□ -0.2
CCL21O00585 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCL21O00585 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCL21O00585 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL21O00585 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL21O00585 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL21O00585 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL21O00585 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.82□□□□□ -0.2
CCL21O00585 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL21O00585 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCL21O00585 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.82□□□□□ -0.2
CCL21O00585 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
CCL21O00585 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCL21O00585 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CCL21O00585 ELK2AP-201ENST00000392510 1007 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms