Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX1O00570 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SOX1O00570 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
SOX1O00570 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SOX1O00570 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.57■□□□□ 0.24
SOX1O00570 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SOX1O00570 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX1O00570 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.57■□□□□ 0.24
SOX1O00570 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SOX1O00570 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.57■□□□□ 0.24
SOX1O00570 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.57■□□□□ 0.24
SOX1O00570 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.57■□□□□ 0.24
SOX1O00570 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.57■□□□□ 0.24
SOX1O00570 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.57■□□□□ 0.24
SOX1O00570 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX1O00570 ALG1L6P-201ENST00000515248 758 ntBASIC16.57■□□□□ 0.24
SOX1O00570 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.57■□□□□ 0.24
SOX1O00570 AL160314.3-201ENST00000556041 767 ntBASIC16.57■□□□□ 0.24
SOX1O00570 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.57■□□□□ 0.24
SOX1O00570 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.57■□□□□ 0.24
SOX1O00570 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX1O00570 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX1O00570 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX1O00570 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX1O00570 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX1O00570 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX1O00570 AL390961.4-201ENST00000623958 2535 ntBASIC16.57■□□□□ 0.24
SOX1O00570 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.57■□□□□ 0.24
SOX1O00570 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SOX1O00570 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SOX1O00570 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.57■□□□□ 0.24
SOX1O00570 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX1O00570 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX1O00570 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.56■□□□□ 0.24
SOX1O00570 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX1O00570 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.56■□□□□ 0.24
SOX1O00570 MRPL37P1-201ENST00000592451 1337 ntBASIC16.56■□□□□ 0.24
SOX1O00570 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX1O00570 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX1O00570 OR2K2-202ENST00000374428 1038 ntBASIC16.56■□□□□ 0.24
SOX1O00570 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX1O00570 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SOX1O00570 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX1O00570 AC136604.1-201ENST00000418535 575 ntBASIC16.56■□□□□ 0.24
SOX1O00570 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX1O00570 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.56■□□□□ 0.24
SOX1O00570 BRI3P1-201ENST00000440440 378 ntBASIC16.56■□□□□ 0.24
SOX1O00570 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.56■□□□□ 0.24
SOX1O00570 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.56■□□□□ 0.24
SOX1O00570 TUBB8P8-201ENST00000458717 1058 ntBASIC16.56■□□□□ 0.24
SOX1O00570 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.56■□□□□ 0.24
SOX1O00570 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
SOX1O00570 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX1O00570 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX1O00570 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.56■□□□□ 0.24
SOX1O00570 AC244250.3-201ENST00000620749 366 ntBASIC16.56■□□□□ 0.24
SOX1O00570 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.56■□□□□ 0.24
SOX1O00570 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SOX1O00570 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX1O00570 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX1O00570 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX1O00570 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.56■□□□□ 0.24
SOX1O00570 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SOX1O00570 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX1O00570 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX1O00570 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.56■□□□□ 0.24
SOX1O00570 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.56■□□□□ 0.24
SOX1O00570 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SOX1O00570 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SOX1O00570 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
SOX1O00570 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.55■□□□□ 0.24
SOX1O00570 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SOX1O00570 HLA-A-202ENST00000376806 1854 ntBASIC16.55■□□□□ 0.24
SOX1O00570 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.55■□□□□ 0.24
SOX1O00570 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SOX1O00570 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SOX1O00570 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.55■□□□□ 0.24
SOX1O00570 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.55■□□□□ 0.24
SOX1O00570 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.55■□□□□ 0.24
SOX1O00570 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.55■□□□□ 0.24
SOX1O00570 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SOX1O00570 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SOX1O00570 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SOX1O00570 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SOX1O00570 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.55■□□□□ 0.24
SOX1O00570 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms