Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LRIT2A6NDA9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LRIT2A6NDA9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRIT2A6NDA9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRIT2A6NDA9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
LRIT2A6NDA9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.02■□□□□ -0
LRIT2A6NDA9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.02■□□□□ -0
LRIT2A6NDA9 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.02■□□□□ -0
LRIT2A6NDA9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRIT2A6NDA9 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
LRIT2A6NDA9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
LRIT2A6NDA9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LRIT2A6NDA9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRIT2A6NDA9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LRIT2A6NDA9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRIT2A6NDA9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.02■□□□□ -0
LRIT2A6NDA9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.02■□□□□ -0
LRIT2A6NDA9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.02■□□□□ -0
LRIT2A6NDA9 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.02■□□□□ -0
LRIT2A6NDA9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.02■□□□□ -0
LRIT2A6NDA9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.02■□□□□ -0
LRIT2A6NDA9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRIT2A6NDA9 AC093214.1-201ENST00000511688 1107 ntBASIC15.02■□□□□ -0
LRIT2A6NDA9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.02■□□□□ -0
LRIT2A6NDA9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.02■□□□□ -0
LRIT2A6NDA9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
LRIT2A6NDA9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.02■□□□□ -0
LRIT2A6NDA9 LINC01115-203ENST00000606068 577 ntBASIC15.02■□□□□ -0
LRIT2A6NDA9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LRIT2A6NDA9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 BTBD7P1-201ENST00000447253 1453 ntBASIC15.01□□□□□ -0.01
LRIT2A6NDA9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 SSR4P1-203ENST00000599569 2260 ntBASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AL512638.1-201ENST00000457493 794 ntBASIC15.01□□□□□ -0.01
LRIT2A6NDA9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 SLED1-202ENST00000512051 380 ntBASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AF228730.6-201ENST00000641497 218 ntBASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AC084121.3-201ENST00000641716 218 ntBASIC15.01□□□□□ -0.01
LRIT2A6NDA9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AC136621.1-201ENST00000624017 2304 ntBASIC15.01□□□□□ -0.01
LRIT2A6NDA9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AC103702.1-201ENST00000548801 2630 ntBASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AC022144.1-201ENST00000602255 1580 ntBASIC15.01□□□□□ -0.01
LRIT2A6NDA9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LRIT2A6NDA9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms