Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV5-4A0A0C4DH59 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 MIR661-201ENST00000384842 89 ntBASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 RARRES2P5-201ENST00000564013 466 ntBASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC009118.2-201ENST00000613275 655 ntBASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV5-4A0A0C4DH59 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 FAM207CP-201ENST00000443486 507 ntBASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 TSPY16P-201ENST00000449843 468 ntBASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 SERBP1P5-201ENST00000510079 1181 ntBASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC023310.3-201ENST00000557027 670 ntBASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC100756.1-201ENST00000562736 682 ntBASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC138749.3-201ENST00000567691 622 ntBASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC116165.1-201ENST00000611806 668 ntBASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV5-4A0A0C4DH59 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms