Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC091046.1-201ENST00000331871 207 ntBASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 MIR4706-201ENST00000582134 82 ntBASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC138649.2-201ENST00000615886 705 ntBASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 LRRC59-203ENST00000576448 1531 ntBASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LOC102724428A0A0B4J2F2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 AL139094.1-201ENST00000405549 1188 ntBASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 FAM8A4P-201ENST00000435433 1213 ntBASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 MPRIPP1-201ENST00000452433 1089 ntBASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 SERPINA13P-202ENST00000478994 924 ntBASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 COX5BP1-201ENST00000507622 393 ntBASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 MIR6727-201ENST00000620702 65 ntBASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LOC102724428A0A0B4J2F2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC011676.5-201ENST00000624864 2660 ntBASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 SPTLC1P5-201ENST00000450718 252 ntBASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 PPY2P-201ENST00000582808 702 ntBASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
LOC102724428A0A0B4J2F2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LOC102724428A0A0B4J2F2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms