Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 AL355864.2-201ENST00000447420 863 ntBASIC21.43■■□□□ 1.02
NINLQ9Y2I6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 CROCCP4-201ENST00000457096 498 ntBASIC21.43■■□□□ 1.02
NINLQ9Y2I6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 COG4-212ENST00000564653 590 ntTSL 5 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 GNRHR2-203ENST00000581100 1187 ntBASIC21.43■■□□□ 1.02
NINLQ9Y2I6 AL645728.2-202ENST00000641679 227 ntBASIC21.43■■□□□ 1.02
NINLQ9Y2I6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 AL662844.4-201ENST00000606367 2838 ntBASIC21.43■■□□□ 1.02
NINLQ9Y2I6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NINLQ9Y2I6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 AC018695.7-201ENST00000624587 2492 ntBASIC21.42■■□□□ 1.02
NINLQ9Y2I6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 MIR6727-201ENST00000620702 65 ntBASIC21.42■■□□□ 1.02
NINLQ9Y2I6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NINLQ9Y2I6 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 PDIA3P1-201ENST00000471856 1510 ntBASIC21.41■■□□□ 1.02
NINLQ9Y2I6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.41■■□□□ 1.02
NINLQ9Y2I6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 RPL28-207ENST00000558815 616 ntTSL 2 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NINLQ9Y2I6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 BNIP3P42-201ENST00000454982 569 ntBASIC21.4■■□□□ 1.02
NINLQ9Y2I6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 AC093433.1-201ENST00000458048 571 ntBASIC21.4■■□□□ 1.02
NINLQ9Y2I6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 AP000812.2-201ENST00000538934 718 ntBASIC21.4■■□□□ 1.02
NINLQ9Y2I6 RN7SL219P-201ENST00000582872 296 ntBASIC21.4■■□□□ 1.02
NINLQ9Y2I6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 BNIP3P29-201ENST00000598302 571 ntBASIC21.4■■□□□ 1.02
NINLQ9Y2I6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21.4■■□□□ 1.02
NINLQ9Y2I6 AC011447.5-201ENST00000616168 564 ntBASIC21.4■■□□□ 1.02
NINLQ9Y2I6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms