Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 AKAP8P1-201ENST00000434743 1349 ntBASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.33■□□□□ 0.2
RABGEF1Q9UJ41 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 AC015911.4-201ENST00000588022 1070 ntBASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RABGEF1Q9UJ41 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 AL136379.1-201ENST00000623471 2642 ntBASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 AL035633.1-201ENST00000406139 838 ntBASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 LINC01225-203ENST00000563550 1244 ntBASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 AL161645.1-201ENST00000622716 1255 ntBASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RABGEF1Q9UJ41 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms